RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SSX2Q16385 188 aa2.57□□□□□ -2
CD44-219ENST00000525685 MICBQ29980 383 aa2.57□□□□□ -2
CD44-219ENST00000525685 ALKBH6Q3KRA9 238 aa2.57□□□□□ -2
CD44-219ENST00000525685 DMRTC1Q5HYR2 192 aa2.57□□□□□ -2
CD44-219ENST00000525685 NXNL2Q5VZ03 156 aa2.57□□□□□ -2
CD44-219ENST00000525685 LPCAT4Q643R3 524 aa2.57□□□□□ -2
CD44-219ENST00000525685 IL34Q6ZMJ4 242 aa2.57□□□□□ -2
CD44-219ENST00000525685 PLEKHG7Q6ZR37 379 aa2.57□□□□□ -2
CD44-219ENST00000525685 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
CD44-219ENST00000525685 ZNF786Q8N393 782 aa2.57□□□□□ -2
CD44-219ENST00000525685 WFDC11Q8NEX6 87 aa2.57□□□□□ -2
CD44-219ENST00000525685 OR51S1Q8NGJ8 323 aa2.57□□□□□ -2
CD44-219ENST00000525685 OR8J1Q8NGP2 316 aa2.57□□□□□ -2
CD44-219ENST00000525685 OR6N2Q8NGY6 317 aa2.57□□□□□ -2
CD44-219ENST00000525685 OR9G1Q8NH87 305 aa2.57□□□□□ -2
CD44-219ENST00000525685 SLC25A40Q8TBP6 338 aa2.57□□□□□ -2
CD44-219ENST00000525685 ZNF596Q8TC21 504 aa2.57□□□□□ -2
CD44-219ENST00000525685 LRRC20Q8TCA0 184 aa2.57□□□□□ -2
CD44-219ENST00000525685 CHCHD10Q8WYQ3 142 aaPredicted RBP2.57□□□□□ -2
CD44-219ENST00000525685 YIPF5Q969M3 257 aa2.57□□□□□ -2
CD44-219ENST00000525685 MRGPRFQ96AM1 343 aa2.57□□□□□ -2
CD44-219ENST00000525685 SLAMF6Q96DU3 332 aa2.57□□□□□ -2
CD44-219ENST00000525685 AMELYQ99218 206 aa2.57□□□□□ -2
CD44-219ENST00000525685 DOK1Q99704 481 aa2.57□□□□□ -2
CD44-219ENST00000525685 COPS4Q9BT78 406 aa2.57□□□□□ -2
CD44-219ENST00000525685 TTTY10Q9BZA0 68 aa2.57□□□□□ -2
CD44-219ENST00000525685 OR2J1Q9GZK6 312 aa2.57□□□□□ -2
CD44-219ENST00000525685 TOLLIPQ9H0E2 274 aa2.57□□□□□ -2
CD44-219ENST00000525685 RGCCQ9H4X1 137 aa2.57□□□□□ -2
CD44-219ENST00000525685 AUNIPQ9H7T9 357 aa2.57□□□□□ -2
CD44-219ENST00000525685 RAB18Q9NP72 206 aa2.57□□□□□ -2
CD44-219ENST00000525685 DYNLRB1Q9NP97 96 aa2.57□□□□□ -2
CD44-219ENST00000525685 MYOZ1Q9NP98 299 aaPredicted RBP2.57□□□□□ -2
CD44-219ENST00000525685 MMP26Q9NRE1 261 aa2.57□□□□□ -2
CD44-219ENST00000525685 PTTG3PQ9NZH4 202 aa2.57□□□□□ -2
CD44-219ENST00000525685 DNAJC27Q9NZQ0 273 aa2.57□□□□□ -2
CD44-219ENST00000525685 ORC6Q9Y5N6 252 aa2.57□□□□□ -2
CD44-219ENST00000525685 CACNA1DQ01668 2161 aa2.57□□□□□ -2
CD44-219ENST00000525685 COL12A1Q99715 3063 aa2.56□□□□□ -2
CD44-219ENST00000525685 PTPN13Q12923 2485 aa2.56□□□□□ -2
CD44-219ENST00000525685 PSMB11A5LHX3 300 aa2.56□□□□□ -2
CD44-219ENST00000525685 C5orf63A6NC05 138 aa2.56□□□□□ -2
CD44-219ENST00000525685 LINC00587B1AMM8 73 aa2.56□□□□□ -2
CD44-219ENST00000525685 ZNF878C9JN71 531 aa2.56□□□□□ -2
CD44-219ENST00000525685 H3BSA7 217 aa2.56□□□□□ -2
CD44-219ENST00000525685 M0R135 149 aa2.56□□□□□ -2
CD44-219ENST00000525685 M0R233 179 aa2.56□□□□□ -2
CD44-219ENST00000525685 DLGAP1O14490 977 aa2.56□□□□□ -2
CD44-219ENST00000525685 AGPAT2O15120 278 aa2.56□□□□□ -2
CD44-219ENST00000525685 WBP4O75554 376 aaKnown RBP2.56□□□□□ -2
CD44-219ENST00000525685 LY6HO94772 140 aa2.56□□□□□ -2
CD44-219ENST00000525685 IGHV1-46P01743 117 aa2.56□□□□□ -2
CD44-219ENST00000525685 ADRA2AP08913 450 aa2.56□□□□□ -2
CD44-219ENST00000525685 ACSM4P0C7M7 580 aa2.56□□□□□ -2
CD44-219ENST00000525685 SLC2A1P11166 492 aa2.56□□□□□ -2
CD44-219ENST00000525685 ZNF44P15621 663 aa2.56□□□□□ -2
CD44-219ENST00000525685 ZNF250P15622 560 aa2.56□□□□□ -2
CD44-219ENST00000525685 ALOX5APP20292 161 aa2.56□□□□□ -2
CD44-219ENST00000525685 KITLGP21583 273 aa2.56□□□□□ -2
CD44-219ENST00000525685 TUBG1P23258 451 aa2.56□□□□□ -2
CD44-219ENST00000525685 HSD11B1P28845 292 aa2.56□□□□□ -2
CD44-219ENST00000525685 OTX1P32242 354 aaPredicted RBP2.56□□□□□ -2
CD44-219ENST00000525685 CX3CR1P49238 355 aa2.56□□□□□ -2
CD44-219ENST00000525685 RGS6P49758 472 aa2.56□□□□□ -2
CD44-219ENST00000525685 HCCSP53701 268 aa2.56□□□□□ -2
CD44-219ENST00000525685 KLF3P57682 345 aaPredicted RBP2.56□□□□□ -2
CD44-219ENST00000525685 CDC42P60953 191 aa2.56□□□□□ -2
CD44-219ENST00000525685 PPP1CBP62140 327 aa2.56□□□□□ -2
CD44-219ENST00000525685 GRB2P62993 217 aaKnown RBP2.56□□□□□ -2
CD44-219ENST00000525685 ECH1Q13011 328 aa2.56□□□□□ -2
CD44-219ENST00000525685 DAZ2Q13117 558 aaKnown RBP2.56□□□□□ -2
CD44-219ENST00000525685 CLEC12BQ2HXU8 276 aa2.56□□□□□ -2
CD44-219ENST00000525685 RSPO1Q2MKA7 263 aaPredicted RBP2.56□□□□□ -2
CD44-219ENST00000525685 CHRFAM7AQ494W8 412 aa2.56□□□□□ -2
CD44-219ENST00000525685 ACTBL2Q562R1 376 aa2.56□□□□□ -2
CD44-219ENST00000525685 KLF17Q5JT82 389 aaPredicted RBP2.56□□□□□ -2
CD44-219ENST00000525685 SPANXN2Q5MJ10 180 aa2.56□□□□□ -2
CD44-219ENST00000525685 GLYATL3Q5SZD4 288 aa2.56□□□□□ -2
CD44-219ENST00000525685 OGFRL1Q5TC84 451 aaPredicted RBP2.56□□□□□ -2
CD44-219ENST00000525685 ZNF691Q5VV52 312 aa2.56□□□□□ -2
CD44-219ENST00000525685 CYB5R2Q6BCY4 276 aa2.56□□□□□ -2
CD44-219ENST00000525685 ELP2Q6IA86 826 aa2.56□□□□□ -2
CD44-219ENST00000525685 LRRN1Q6UXK5 716 aa2.56□□□□□ -2
CD44-219ENST00000525685 SPNS3Q6ZMD2 512 aa2.56□□□□□ -2
CD44-219ENST00000525685 PGAP1Q75T13 922 aa2.56□□□□□ -2
CD44-219ENST00000525685 SSX6Q7RTT6 188 aa2.56□□□□□ -2
CD44-219ENST00000525685 SMIM15Q7Z3B0 74 aa2.56□□□□□ -2
CD44-219ENST00000525685 NAA40Q86UY6 237 aa2.56□□□□□ -2
CD44-219ENST00000525685 SELENOHQ8IZQ5 122 aaKnown RBP2.56□□□□□ -2
CD44-219ENST00000525685 ZCCHC24Q8N2G6 241 aaKnown RBP2.56□□□□□ -2
CD44-219ENST00000525685 PACRGLQ8N7B6 248 aa2.56□□□□□ -2
CD44-219ENST00000525685 TMEM104Q8NE00 496 aa2.56□□□□□ -2
CD44-219ENST00000525685 OR10J5Q8NHC4 309 aa2.56□□□□□ -2
CD44-219ENST00000525685 OTOSQ8NHW6 89 aa2.56□□□□□ -2
CD44-219ENST00000525685 RNASE11Q8TAA1 199 aaKnown RBP2.56□□□□□ -2
CD44-219ENST00000525685 SYNPRQ8TBG9 265 aa2.56□□□□□ -2
CD44-219ENST00000525685 KLF14Q8TD94 323 aaPredicted RBP2.56□□□□□ -2
CD44-219ENST00000525685 RNF133Q8WVZ7 376 aa2.56□□□□□ -2
CD44-219ENST00000525685 APH1BQ8WW43 257 aa2.56□□□□□ -2
CD44-219ENST00000525685 SPTSSAQ969W0 71 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms