RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	COA1	Q9GZY4	146 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	CST9L	Q9H4G1	147 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	SLCO1B3	Q9NPD5	702 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	RBM22	Q9NW64	420 aa	Known RBP eCLIP	3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	SPANXC	Q9NY87	97 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	ZNF230	Q9UIE0	474 aa	Predicted RBP	3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	PRND	Q9UKY0	176 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	PKIG	Q9Y2B9	76 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	POLR1D	Q9Y2S0	133 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	HDGFL3	Q9Y3E1	203 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	HSPE1-MOB4	S4R3N1	261 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	PHIP	Q8WWQ0	1821 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	ARID1A	O14497	2285 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	DUOX1	Q9NRD9	1551 aa		3.04	□□□□□ -1.92
CTNNA1-238	ENST00000523298	SCN4A	P35499	1836 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	FOCAD	Q5VW36	1801 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	DOCK2	Q92608	1830 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	TRAV36DV7	A0A075B6V5	113 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298		A0A087WUU8	490 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	NCBP2L	A6PVI3	153 aa	Known RBP	3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298		J3KT08	172 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	CORT	O00230	105 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	NPIPB7	O75200	414 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	IGKV1D-16	P01601	117 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	RPS3	P23396	243 aa	Known RBP eCLIP	3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	CDK2	P24941	298 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	HNRNPA3	P51991	378 aa	Known RBP	3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	SUB1	P53999	127 aa	Known RBP eCLIP	3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	HBA1	P69905	142 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	BTN1A1	Q13410	526 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	CCSMST1	Q4G0I0	132 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	TPTE2P1	Q5T6R2	138 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	PNKD	Q8N490	385 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	FAM24B	Q8N5W8	94 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298		Q8N7P7	452 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	COX18	Q8N8Q8	333 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	TSTD1	Q8NFU3	115 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	OR51Q1	Q8NH59	317 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	TCTEX1D2	Q8WW35	142 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	SRSF12	Q8WXF0	261 aa	Known RBP	3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	ARL11	Q969Q4	196 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	DCUN1D1	Q96GG9	259 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	SLC35G5	Q96KT7	338 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	ZNF649	Q9BS31	505 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	EMC6	Q9BV81	110 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	SUCNR1	Q9BXA5	334 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	SNHG12	Q9BXW3	62 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	SH3BGRL3	Q9H299	93 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	CDC42EP4	Q9H3Q1	356 aa	Known RBP	3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	METTL1	Q9UBP6	276 aa	Known RBP	3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	RAB22A	Q9UL26	194 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	COL4A5	P29400	1685 aa		3.03	□□□□□ -1.92
CTNNA1-238	ENST00000523298	ATAD5	Q96QE3	1844 aa		3.03	□□□□□ -1.93
CTNNA1-238	ENST00000523298	RIC1	Q4ADV7	1423 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	MYH6	P13533	1939 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	FAM236D	A0A1B0GTK5	79 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298		A8MWP6	167 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298		H7C417	338 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298		I3L521	148 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	DNASE2	O00115	360 aa	Predicted RBP	3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	CCL25	O15444	150 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	YIF1A	O95070	293 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	CDRT1	O95170	752 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	APOA2	P02652	100 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	TTR	P02766	147 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	IL3	P08700	152 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	MRPL3	P09001	348 aa	Known RBP	3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	FAM236C	P0DP71	79 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	RPL7	P18124	248 aa	Known RBP	3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	CXCL3	P19876	107 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	AZU1	P20160	251 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	SLC2A5	P22732	501 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	NPY1R	P25929	384 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	CASP1	P29466	404 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	BLVRB	P30043	206 aa	Predicted RBP	3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	MIP	P30301	263 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	BTC	P35070	178 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	TAS2R30	P59541	319 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	COPZ1	P61923	177 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	RPS28	P62857	69 aa	Known RBP	3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	SELENOW	P63302	87 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	SLC35A2	P78381	396 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	TNFAIP6	P98066	277 aa	Predicted RBP	3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	RGN	Q15493	299 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	MORN2	Q502X0	79 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	C2orf83	Q53S99	150 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	TMEM69	Q5SWH9	247 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	ZNF684	Q5T5D7	378 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	SPATA31B1P	Q5VZV4	182 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	FAM183BP	Q6ZVS7	135 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	MRPL55	Q7Z7F7	128 aa	Known RBP	3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	CROCCP2	Q86T23	111 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	TMEM150A	Q86TG1	271 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	OR5W2	Q8NH69	310 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	NEIL3	Q8TAT5	605 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	TMEM101	Q96IK0	257 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	RNF157	Q96PX1	679 aa		3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	MRPL45	Q9BRJ2	306 aa	Known RBP	3.02	□□□□□ -1.93
CTNNA1-238	ENST00000523298	LXN	Q9BS40	222 aa		3.02	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms