RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 LINC01619G3V211 115 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 OVOL1O14753 267 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 ARPC1BO15143 372 aaKnown RBP12.56□□□□□ -0.4
CLN8-206ENST00000523237 CRYGBP07316 175 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 CLEC2LP0C7M8 214 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 DUTP33316 252 aaKnown RBP12.56□□□□□ -0.4
CLN8-206ENST00000523237 CD69Q07108 199 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 DDB2Q92466 427 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 DCUN1D4Q92564 292 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 B9D2Q9BPU9 175 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 RNF167Q9H6Y7 350 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 ETV7Q9Y603 341 aa12.56□□□□□ -0.4
CLN8-206ENST00000523237 COL7A1Q02388 2944 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 LINC00473A8K010 186 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 H3BUA1 57 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 J3QRK9 145 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 IGHV3-11P01762 117 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 TRGV3P03979 118 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 NFYAP23511 347 aaPredicted RBP12.55□□□□□ -0.4
CLN8-206ENST00000523237 PJVKQ0ZLH3 352 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 VMA21Q3ZAQ7 101 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 IDNKQ5T6J7 187 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 ZNF645Q8N7E2 425 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 TMEM68Q96MH6 324 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 ZNF355PQ9NSJ1 428 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 OR2W1Q9Y3N9 320 aa12.55□□□□□ -0.4
CLN8-206ENST00000523237 IGHV4OR15-8A0A075B7B6 117 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 A0A087WW49 117 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 SRRM4A7MD48 611 aaKnown RBP12.54□□□□□ -0.4
CLN8-206ENST00000523237 SLC22A5O76082 557 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 CRYZL1O95825 349 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 HSPB1P04792 205 aaKnown RBP12.54□□□□□ -0.4
CLN8-206ENST00000523237 SLURP1P55000 103 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 SSBP2P81877 361 aaPredicted RBP12.54□□□□□ -0.4
CLN8-206ENST00000523237 TIMM50Q3ZCQ8 353 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 ZNF429Q86V71 674 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 TEX45Q8NA69 505 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 POC5Q8NA72 575 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 OSR1Q8TAX0 266 aaPredicted RBP12.54□□□□□ -0.4
CLN8-206ENST00000523237 DLX4Q92988 240 aaPredicted RBP12.54□□□□□ -0.4
CLN8-206ENST00000523237 RHOVQ96L33 236 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 PRR25Q96S07 402 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 ANXA10Q9UJ72 324 aa12.54□□□□□ -0.4
CLN8-206ENST00000523237 ZNF256Q9Y2P7 627 aaPredicted RBP12.54□□□□□ -0.4
CLN8-206ENST00000523237 A0A0A6YYH2 397 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 A0A0G2JLM5 398 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 A6NJ64 397 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 SSX5O60225 188 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 TMEM127O75204 238 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 HLA-DQB1P01920 261 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 UBE2KP61086 200 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 VAX1Q5SQQ9 334 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 KCTD9Q7L273 389 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 OR5T1Q8NG75 326 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 OR5H6Q8NGV6 325 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 SLC25A38Q96DW6 304 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 PHB2Q99623 299 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 PRELID3BQ9Y3B1 194 aa12.53□□□□□ -0.4
CLN8-206ENST00000523237 TRAV18A0A075B6X5 111 aa12.52□□□□□ -0.41
CLN8-206ENST00000523237 C13orf42A0A1B0GVH6 325 aa12.52□□□□□ -0.41
CLN8-206ENST00000523237 SAP30O75446 220 aa12.52□□□□□ -0.41
CLN8-206ENST00000523237 TUSC2O75896 110 aa12.52□□□□□ -0.41
CLN8-206ENST00000523237 BEST4Q8NFU0 473 aa12.52□□□□□ -0.41
CLN8-206ENST00000523237 DCUN1D5Q9BTE7 237 aa12.52□□□□□ -0.41
CLN8-206ENST00000523237 DIABLOQ9NR28 239 aa12.52□□□□□ -0.41
CLN8-206ENST00000523237 SPATA2Q9UM82 520 aa12.52□□□□□ -0.41
CLN8-206ENST00000523237 MRPS7Q9Y2R9 242 aaKnown RBP12.52□□□□□ -0.41
CLN8-206ENST00000523237 RBMX2Q9Y388 322 aaKnown RBP12.52□□□□□ -0.41
CLN8-206ENST00000523237 LSM4Q9Y4Z0 139 aaKnown RBP12.52□□□□□ -0.41
CLN8-206ENST00000523237 CREBL2O60519 120 aaPredicted RBP12.51□□□□□ -0.41
CLN8-206ENST00000523237 FCGR3BO75015 233 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 LY86O95711 162 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 ARPC4P59998 168 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 TNXAQ16473 311 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 PRSS8Q16651 343 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 MRGPRG-AS1Q2M3A8 158 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 C11orf87Q6NUJ2 197 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 ACSM6Q6P461 480 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 IDO2Q6ZQW0 420 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 CROCCP3Q8IVE0 287 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 VCX3AQ9NNX9 186 aa12.51□□□□□ -0.41
CLN8-206ENST00000523237 A0A087WXM4 84 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 IGKV1D-13A0A0B4J2D9 117 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 ACTL6BO94805 426 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 BRI3O95415 125 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 IGLV2-14P01704 120 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 IGKV1-13P0DP09 117 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 AADACP22760 399 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 CDK10Q15131 360 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 OVCH2Q7RTZ1 564 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 HOGA1Q86XE5 327 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 SRSF12Q8WXF0 261 aaKnown RBP12.5□□□□□ -0.41
CLN8-206ENST00000523237 ACOT12Q8WYK0 555 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 HSD17B10Q99714 261 aaKnown RBP12.5□□□□□ -0.41
CLN8-206ENST00000523237 TINAGL1Q9GZM7 467 aaPredicted RBP12.5□□□□□ -0.41
CLN8-206ENST00000523237 RANGRFQ9HD47 186 aaPredicted RBP12.5□□□□□ -0.41
CLN8-206ENST00000523237 COA4Q9NYJ1 87 aa12.5□□□□□ -0.41
CLN8-206ENST00000523237 SORL1Q92673 2214 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms