RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 TNFSF12O43508 249 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 IGKV1-13P0DP09 117 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 AADACP22760 399 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 DUTP33316 252 aaKnown RBP11.08□□□□□ -0.64
VEGFA-221ENST00000520265 RORCP51449 518 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 HERV-K104P61576 105 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 TAGLNQ01995 201 aaKnown RBP11.08□□□□□ -0.64
VEGFA-221ENST00000520265 CFHR3Q02985 330 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 ACTBL2Q562R1 376 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 IDO2Q6ZQW0 420 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 HOGA1Q86XE5 327 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 LINC00482Q8N8I6 264 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 LFNGQ8NES3 379 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 ACOT12Q8WYK0 555 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
VEGFA-221ENST00000520265 RAX2Q96IS3 184 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 MS4A10Q96PG2 267 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 KLK15Q9H2R5 256 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 EHFQ9NZC4 300 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 RBMX2Q9Y388 322 aaKnown RBP11.08□□□□□ -0.64
VEGFA-221ENST00000520265 LINC00473A8K010 186 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 MPPED1O15442 326 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 SLC22A5O76082 557 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 ACTL6BO94805 426 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 HLA-DQB1P01920 261 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 EIF4EP06730 217 aaKnown RBP11.07□□□□□ -0.64
VEGFA-221ENST00000520265 APELAP0DMC3 54 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 PSMB8P28062 276 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 HOXD3P31249 432 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-221ENST00000520265 CDX1P47902 265 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-221ENST00000520265 LGALS7P47929 136 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 TPPP2P59282 170 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 TNXAQ16473 311 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 RNASE12Q5GAN4 147 aaKnown RBP11.07□□□□□ -0.64
VEGFA-221ENST00000520265 FOXB2Q5VYV0 432 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 MZT2AQ6P582 158 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 SNX29P2Q8IUI4 249 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 C4orf3Q8WVX3 66 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 AP3S1Q92572 193 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 SLC5A7Q9GZV3 580 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 GNB4Q9HAV0 340 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 VSIG4Q9Y279 399 aa11.07□□□□□ -0.64
VEGFA-221ENST00000520265 NOTCH1P46531 2555 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 HPGDSO60760 199 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 NOL3O60936 208 aaKnown RBP11.06□□□□□ -0.64
VEGFA-221ENST00000520265 DUS4LO95620 317 aaKnown RBP11.06□□□□□ -0.64
VEGFA-221ENST00000520265 PMP2P02689 132 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 PPIFP30405 207 aaKnown RBP11.06□□□□□ -0.64
VEGFA-221ENST00000520265 PRSS3P35030 304 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 RAB9AP51151 201 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 PJVKQ0ZLH3 352 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 CDK10Q15131 360 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 TMEM177Q53S58 311 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 ZNF562Q6V9R5 426 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 TCTEX1D1Q8N7M0 179 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 OR5T1Q8NG75 326 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 OR5M8Q8NGP6 311 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 OR5H2Q8NGV7 314 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 OR4S2Q8NH73 311 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 MRAPQ8TCY5 172 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 SNAPC3Q92966 411 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 GPHA2Q96T91 129 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 HSD17B10Q99714 261 aaKnown RBP11.06□□□□□ -0.64
VEGFA-221ENST00000520265 GPR61Q9BZJ8 451 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 ZNF580Q9UK33 172 aa11.06□□□□□ -0.64
VEGFA-221ENST00000520265 GABARAPO95166 117 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 PPYP01298 95 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 IGLV2-23P01705 113 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 IGHV3-11P01762 117 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 TAS2R46P59540 309 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 PYHIN1Q6K0P9 492 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 ANKRD13BQ86YJ7 626 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 RNF152Q8N8N0 203 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 WFDC9Q8NEX5 89 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 OR11H1Q8NG94 326 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 OR5AP2Q8NGF4 316 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 MCRIP2Q9BUT9 160 aaKnown RBP11.05□□□□□ -0.64
VEGFA-221ENST00000520265 CCL28Q9NRJ3 127 aa11.05□□□□□ -0.64
VEGFA-221ENST00000520265 NOTCH3Q9UM47 2321 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
VEGFA-221ENST00000520265 ARPC1BO15143 372 aaKnown RBP11.04□□□□□ -0.64
VEGFA-221ENST00000520265 RGS5O15539 181 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 SOX15O60248 233 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 CREBL2O60519 120 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-221ENST00000520265 IGLV1-40P01703 118 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 APOA1P02647 267 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 TRGV3P03979 118 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 SAA1P0DJI8 122 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-221ENST00000520265 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-221ENST00000520265 HLA-DMAP28067 261 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 RFX2P48378 723 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 UBE2KP61086 200 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 RPL30P62888 115 aaKnown RBP11.04□□□□□ -0.64
VEGFA-221ENST00000520265 AADACL3Q5VUY0 350 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 SSX9Q7RTT3 188 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 REC114Q7Z4M0 266 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 CLVS1Q8IUQ0 354 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-221ENST00000520265 VKORC1L1Q8N0U8 176 aa11.04□□□□□ -0.64
VEGFA-221ENST00000520265 ZNF491Q8N8L2 437 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms