RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 IFNA10P01566 189 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 ZNF735P0CB33 412 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 CT45A6P0DMU7 189 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 CT45A5P0DMU8 189 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 CT45A7P0DMV0 189 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 IGLL1P15814 213 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 PSMB6P28072 239 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 GABARAPL2P60520 117 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 RPL23AP62750 156 aaKnown RBP7.34□□□□□ -1.23
HDAC3-215ENST00000519474 GAGE1Q13065 139 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 OR56B1Q8NGI3 324 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 SETD6Q8TBK2 473 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 MAFIPQ8WZ33 124 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 PTX4Q96A99 478 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 ABHD14BQ96IU4 210 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 CMSS1Q9BQ75 279 aaKnown RBP7.34□□□□□ -1.23
HDAC3-215ENST00000519474 HSPB9Q9BQS6 159 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 MRPL20Q9BYC9 149 aaKnown RBP7.34□□□□□ -1.23
HDAC3-215ENST00000519474 C11orf54Q9H0W9 315 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-215ENST00000519474 IFI27L2Q9H2X8 130 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 BIN3Q9NQY0 253 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 NDUFB11Q9NX14 153 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 OR1A1Q9P1Q5 309 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 RNF150Q9ULK6 438 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 MGAT4AQ9UM21 535 aa7.34□□□□□ -1.23
HDAC3-215ENST00000519474 SAA2-SAA4A0A096LPE2 208 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 A0A1W2PPQ1 181 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 AP4M1O00189 453 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 RAB29O14966 203 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 CTXN2P0C2S0 81 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 SAA2P0DJI9 122 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-215ENST00000519474 SLC2A2P11168 524 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-215ENST00000519474 CD36P16671 472 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 CD33P20138 364 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 RAB3BP20337 219 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 FGF9P31371 208 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-215ENST00000519474 THBS3P49746 956 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 PPP5CP53041 499 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 LINC00205P59089 165 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 ACTBP60709 375 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 RPL39P5Q59GN2 51 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 GPR107Q5VW38 600 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 C22orf42Q6IC83 251 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 TEX38Q6PEX7 206 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 PET117Q6UWS5 81 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 LCNL1Q6ZST4 164 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 FOXRED2Q8IWF2 684 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 COMMD1Q8N668 190 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 NPBQ8NG41 125 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 OR2AK2Q8NG84 335 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 OR10R2Q8NGX6 335 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 ZNF479Q96JC4 524 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 TOLLIPQ9H0E2 274 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 TXNL4BQ9NX01 149 aaKnown RBP7.33□□□□□ -1.24
HDAC3-215ENST00000519474 CCDC59Q9P031 241 aaKnown RBP7.33□□□□□ -1.24
HDAC3-215ENST00000519474 PIPOXQ9P0Z9 390 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 SLC23A1Q9UHI7 598 aa7.33□□□□□ -1.24
HDAC3-215ENST00000519474 A0A0A6YYH2 397 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 A6NJ64 397 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 TRDCB7Z8K6 153 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 FCN1O00602 326 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 HSPA12AO43301 675 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 PF4P02776 101 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 IFNA6P05013 189 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 IGF1P05019 195 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 RPLP1P05386 114 aaKnown RBP7.32□□□□□ -1.24
HDAC3-215ENST00000519474 TFAP2AP05549 437 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 GNB3P16520 340 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 RAB6AP20340 208 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 ZBTB25P24278 435 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 PPIFP30405 207 aaKnown RBP7.32□□□□□ -1.24
HDAC3-215ENST00000519474 MYCNOSP40205 109 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 SLC35B1P78383 322 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 HLA-DRB3P79483 266 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 CFHR3Q02985 330 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 KIAA0141Q14154 515 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-215ENST00000519474 MMDQ15546 238 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 GLDNQ6ZMI3 551 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-215ENST00000519474 MOB1BQ7L9L4 216 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 MRPL41Q8IXM3 137 aaKnown RBP7.32□□□□□ -1.24
HDAC3-215ENST00000519474 LINC00482Q8N8I6 264 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 RNF152Q8N8N0 203 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 OR2D3Q8NGH3 330 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 OR5AN1Q8NGI8 311 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 RAB3CQ96E17 227 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 P2RX4Q99571 388 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 OR51E2Q9H255 320 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 Q9H521 79 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 ELF5Q9UKW6 265 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-215ENST00000519474 RPH3ALQ9UNE2 315 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 VWFP04275 2813 aa7.32□□□□□ -1.24
HDAC3-215ENST00000519474 IGHV7-81A0A0B4J1V7 117 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 SMIM30A4D0T7 59 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 H0YJW9 148 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 MFNGO00587 321 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 NBR2O15453 112 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 NDUFA3O95167 84 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 IGHG4P01861 327 aa7.31□□□□□ -1.24
HDAC3-215ENST00000519474 ELANEP08246 267 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms