RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 PLET1Q6UQ28 207 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TBC1D26Q86UD7 250 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 FOXRED2Q8IWF2 684 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ODF3L1Q8IXM7 274 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 DYNAPQ8N1N2 210 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CENPSQ8N2Z9 138 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ZDHHC22Q8N966 263 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ZNF383Q8NA42 475 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR5AN1Q8NGI8 311 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR4F5Q8NH21 305 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR2T6Q8NHC8 308 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OSR1Q8TAX0 266 aaPredicted RBP4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ZFAND2BQ8WV99 257 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TRIM63Q969Q1 353 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RRNAD1Q96FB5 475 aaKnown RBP4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 HARBI1Q96MB7 349 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 PDCD10Q9BUL8 212 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CHIAQ9BZP6 476 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 FXYD6Q9H0Q3 95 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 BEX1Q9HBH7 125 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SLC2A9Q9NRM0 540 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SLC2A8Q9NY64 477 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 METTL1Q9UBP6 276 aaKnown RBP4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ABCA2Q9BZC7 2435 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 MED13LQ71F56 2210 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 WNK2Q9Y3S1 2297 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CELSR1Q9NYQ6 3014 aa4.38□□□□□ -1.71
SCARNA16.4-201ENST00000516956 KIAA2026Q5HYC2 2103 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TLN2Q9Y4G6 2542 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CSMD1Q96PZ7 3565 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 A0A1B0GUS0 222 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 A6NDX4 124 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 FAM90A9PA6NNJ1 464 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RRHO14718 337 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RBFOX2O43251 390 aaKnown RBP eCLIP4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 FGF16O43320 207 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 KCNAB3O43448 404 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 NDUFB6O95139 128 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SPDEFO95238 335 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 DHFRP00374 187 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ZNF735P0CB33 412 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RPA2P15927 270 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 PI3P19957 117 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CCR6P51684 374 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 AKR1C2P52895 323 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RAG2P55895 527 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 UBE2MP61081 183 aaKnown RBP4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RND3P61587 244 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 GNB1P62873 340 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SLC35B1P78383 322 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TMEM267Q0VDI3 215 aaPredicted RBP4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 FOXL1Q12952 345 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ASAH1Q13510 395 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 DCTN2Q13561 401 aaKnown RBP4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TMEM177Q53S58 311 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 LDLRAD2Q5SZI1 272 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SSX9Q7RTT3 188 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 H2BFWTQ7Z2G1 175 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SLC35E3Q7Z769 313 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 LHFPL1Q86WI0 220 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ZNF695Q8IW36 515 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 MRPL41Q8IXM3 137 aaKnown RBP4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CFHR4Q92496 578 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 AJUBAQ96IF1 538 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CLCC1Q96S66 551 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 PHB2Q99623 299 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 GON7Q9BXV9 100 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RANBP3Q9H6Z4 567 aaPredicted RBP4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 NAA60Q9H7X0 242 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 GPN1Q9HCN4 374 aaPredicted RBP4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 GPR132Q9UNW8 380 aa4.37□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TRAV6A0A075B6T7 132 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 LINC00473A8K010 186 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 H0Y980 276 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 HAX1O00165 279 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ARPC1BO15143 372 aaKnown RBP4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CYB5BO43169 146 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SLC25A17O43808 307 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR2A4O95047 310 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 KRASP01116 189 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 IFNA21P01568 189 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TCRBP04435 133 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 H2AFB2P0C5Z0 115 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 VDAC1P21796 283 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 VDAC2P45880 294 aaPredicted RBP4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 MECP2P51608 486 aaKnown RBP4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 UBE2KP61086 200 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 EBI3Q14213 229 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 HABP2Q14520 560 aaPredicted RBP4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 PSG5Q15238 335 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 C5orf64Q2M2E5 130 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RGS21Q2M5E4 152 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SP6Q3SY56 376 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TMEM128Q5BJH2 165 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 THOC7Q6I9Y2 204 aaKnown RBP4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CENPVQ7Z7K6 275 aaPredicted RBP4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 MMD2Q8IY49 270 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 LGI3Q8N145 548 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TEX45Q8NA69 505 aa4.36□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR4A16Q8NH70 328 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms