RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 A0A0G2JLM5 398 aa13.48□□□□□ -0.25
DDX41-217ENST00000515562 ATP6V1G2O95670 118 aa13.48□□□□□ -0.25
DDX41-217ENST00000515562 CRYGBP07316 175 aa13.48□□□□□ -0.25
DDX41-217ENST00000515562 SSBP2P81877 361 aaPredicted RBP13.48□□□□□ -0.25
DDX41-217ENST00000515562 TPRA1Q86W33 373 aa13.48□□□□□ -0.25
DDX41-217ENST00000515562 SPARTQ8N0X7 666 aa13.48□□□□□ -0.25
DDX41-217ENST00000515562 BVESQ8NE79 360 aa13.48□□□□□ -0.25
DDX41-217ENST00000515562 OR6Q1Q8NGQ2 317 aa13.48□□□□□ -0.25
DDX41-217ENST00000515562 C5orf30Q96GV9 206 aa13.48□□□□□ -0.25
DDX41-217ENST00000515562 U3KQK5 164 aa13.48□□□□□ -0.25
DDX41-217ENST00000515562 C13orf42A0A1B0GVH6 325 aa13.47□□□□□ -0.25
DDX41-217ENST00000515562 SMIM30A4D0T7 59 aa13.47□□□□□ -0.25
DDX41-217ENST00000515562 ZP3P21754 424 aa13.47□□□□□ -0.25
DDX41-217ENST00000515562 PJVKQ0ZLH3 352 aa13.47□□□□□ -0.25
DDX41-217ENST00000515562 VMA21Q3ZAQ7 101 aa13.47□□□□□ -0.25
DDX41-217ENST00000515562 HACD4Q5VWC8 232 aa13.47□□□□□ -0.25
DDX41-217ENST00000515562 DDB2Q92466 427 aa13.47□□□□□ -0.25
DDX41-217ENST00000515562 YTHDF1Q9BYJ9 559 aaKnown RBP13.47□□□□□ -0.25
DDX41-217ENST00000515562 SSR3Q9UNL2 185 aa13.47□□□□□ -0.25
DDX41-217ENST00000515562 BRI3O95415 125 aa13.46□□□□□ -0.25
DDX41-217ENST00000515562 CTXN2P0C2S0 81 aa13.46□□□□□ -0.25
DDX41-217ENST00000515562 DUTP33316 252 aaKnown RBP13.46□□□□□ -0.25
DDX41-217ENST00000515562 CDNFQ49AH0 187 aa13.46□□□□□ -0.25
DDX41-217ENST00000515562 OSR1Q8TAX0 266 aaPredicted RBP13.46□□□□□ -0.25
DDX41-217ENST00000515562 OR4C12Q96R67 309 aa13.46□□□□□ -0.25
DDX41-217ENST00000515562 DCSTAMPQ9H295 470 aa13.46□□□□□ -0.25
DDX41-217ENST00000515562 RANGRFQ9HD47 186 aaPredicted RBP13.46□□□□□ -0.25
DDX41-217ENST00000515562 IGKV1D-8A0A087WSZ0 117 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 CREBL2O60519 120 aaPredicted RBP13.45□□□□□ -0.26
DDX41-217ENST00000515562 CRYZL1O95825 349 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 SPNP16150 400 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 AADACP22760 399 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 UBE2KP61086 200 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 SFXN4Q6P4A7 337 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 ZNF645Q8N7E2 425 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 TEX45Q8NA69 505 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 OR5T1Q8NG75 326 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 ELOVL1Q9BW60 279 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 DAPK2Q9UIK4 370 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 ELF5Q9UKW6 265 aaPredicted RBP13.45□□□□□ -0.26
DDX41-217ENST00000515562 SORL1Q92673 2214 aa13.45□□□□□ -0.26
DDX41-217ENST00000515562 SRRM4A7MD48 611 aaKnown RBP13.44□□□□□ -0.26
DDX41-217ENST00000515562 SLC22A5O76082 557 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 GP9P14770 177 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 CD36P16671 472 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 GNG2P59768 71 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 PRSS8Q16651 343 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 ZNF773Q6PK81 442 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 LGALS14Q8TCE9 139 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 PHB2Q99623 299 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 ST6GALNAC5Q9BVH7 336 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 TINAGL1Q9GZM7 467 aaPredicted RBP13.44□□□□□ -0.26
DDX41-217ENST00000515562 RRP15Q9Y3B9 282 aaKnown RBP13.44□□□□□ -0.26
DDX41-217ENST00000515562 OR2W1Q9Y3N9 320 aa13.44□□□□□ -0.26
DDX41-217ENST00000515562 TMEM235A6NFC5 223 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 LINC00473A8K010 186 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 SCAND1P57086 179 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 CNIH2Q6PI25 160 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 KCTD9Q7L273 389 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 NUDCD2Q8WVJ2 157 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 USMG5Q96IX5 58 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 ASCL2Q99929 193 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 COA4Q9NYJ1 87 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 MRPS7Q9Y2R9 242 aaKnown RBP13.43□□□□□ -0.26
DDX41-217ENST00000515562 PRELID3BQ9Y3B1 194 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 TENM3Q9P273 2699 aa13.43□□□□□ -0.26
DDX41-217ENST00000515562 HLA-DQB1P01920 261 aa13.42□□□□□ -0.26
DDX41-217ENST00000515562 TNXAQ16473 311 aa13.42□□□□□ -0.26
DDX41-217ENST00000515562 IDO2Q6ZQW0 420 aa13.42□□□□□ -0.26
DDX41-217ENST00000515562 OVCH2Q7RTZ1 564 aa13.42□□□□□ -0.26
DDX41-217ENST00000515562 SRSF12Q8WXF0 261 aaKnown RBP13.42□□□□□ -0.26
DDX41-217ENST00000515562 ACOT12Q8WYK0 555 aa13.42□□□□□ -0.26
DDX41-217ENST00000515562 RHBDL2Q9NX52 303 aa13.42□□□□□ -0.26
DDX41-217ENST00000515562 KMT2CQ8NEZ4 4911 aaKnown RBP13.42□□□□□ -0.26
DDX41-217ENST00000515562 ANKRD34BA5PLL1 514 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 MSGN1A6NI15 193 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 MPPED1O15442 326 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 ACTL6BO94805 426 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 SAA1P0DJI8 122 aaPredicted RBP13.41□□□□□ -0.26
DDX41-217ENST00000515562 NFYAP23511 347 aaPredicted RBP13.41□□□□□ -0.26
DDX41-217ENST00000515562 SDC2P34741 201 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 CDK10Q15131 360 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 MRGPRG-AS1Q2M3A8 158 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 ANKRD13BQ86YJ7 626 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 ADAD2Q8NCV1 583 aaKnown RBP13.41□□□□□ -0.26
DDX41-217ENST00000515562 DCUN1D5Q9BTE7 237 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 RSRP1Q9BUV0 290 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 OR51E2Q9H255 320 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 ANXA10Q9UJ72 324 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 RBMX2Q9Y388 322 aaKnown RBP13.41□□□□□ -0.26
DDX41-217ENST00000515562 ETV7Q9Y603 341 aa13.41□□□□□ -0.26
DDX41-217ENST00000515562 J3QRK9 145 aa13.4□□□□□ -0.26
DDX41-217ENST00000515562 FCGR3BO75015 233 aa13.4□□□□□ -0.26
DDX41-217ENST00000515562 IGLV1-51P01701 117 aa13.4□□□□□ -0.26
DDX41-217ENST00000515562 OR9G9P0C7N8 305 aa13.4□□□□□ -0.26
DDX41-217ENST00000515562 DYRK1AQ13627 763 aa13.4□□□□□ -0.26
DDX41-217ENST00000515562 ZNF343Q6P1L6 599 aa13.4□□□□□ -0.26
DDX41-217ENST00000515562 MMD2Q8IY49 270 aa13.4□□□□□ -0.26
DDX41-217ENST00000515562 OR4S2Q8NH73 311 aa13.4□□□□□ -0.26
DDX41-217ENST00000515562 HSD17B10Q99714 261 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms