RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 VMA21Q3ZAQ7 101 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 TMEM177Q53S58 311 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 HACD4Q5VWC8 232 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 H1FOOQ8IZA3 346 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-215ENST00000515516 POC5Q8NA72 575 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 OR5T1Q8NG75 326 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 RHOVQ96L33 236 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 PHB2Q99623 299 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 DCUN1D5Q9BTE7 237 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 ELOVL1Q9BW60 279 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 DCSTAMPQ9H295 470 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 TPSG1Q9NRR2 321 aa10.57□□□□□ -0.72
TCOF1-215ENST00000515516 RRP15Q9Y3B9 282 aaKnown RBP10.57□□□□□ -0.72
TCOF1-215ENST00000515516 LSM4Q9Y4Z0 139 aaKnown RBP10.57□□□□□ -0.72
TCOF1-215ENST00000515516 J3QRK9 145 aa10.56□□□□□ -0.72
TCOF1-215ENST00000515516 SLC22A5O76082 557 aa10.56□□□□□ -0.72
TCOF1-215ENST00000515516 IGLV2-23P01705 113 aa10.56□□□□□ -0.72
TCOF1-215ENST00000515516 ZNF773Q6PK81 442 aa10.56□□□□□ -0.72
TCOF1-215ENST00000515516 NR2C2APQ86WQ0 139 aa10.56□□□□□ -0.72
TCOF1-215ENST00000515516 OR6Q1Q8NGQ2 317 aa10.56□□□□□ -0.72
TCOF1-215ENST00000515516 OR4C12Q96R67 309 aa10.56□□□□□ -0.72
TCOF1-215ENST00000515516 RANGRFQ9HD47 186 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-215ENST00000515516 MPPED1O15442 326 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 CREBL2O60519 120 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-215ENST00000515516 CRYZL1O95825 349 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 CRYGBP07316 175 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
TCOF1-215ENST00000515516 CD36P16671 472 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 ZP3P21754 424 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 DUTP33316 252 aaKnown RBP10.55□□□□□ -0.72
TCOF1-215ENST00000515516 PJVKQ0ZLH3 352 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 SFXN4Q6P4A7 337 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 ZNF645Q8N7E2 425 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 TEX45Q8NA69 505 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 OSR1Q8TAX0 266 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-215ENST00000515516 WWC2-AS2Q96NR7 200 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 OR51E2Q9H255 320 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 ELF5Q9UKW6 265 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-215ENST00000515516 PRELID3BQ9Y3B1 194 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 SMAD5-AS1Q9Y6J3 95 aa10.55□□□□□ -0.72
TCOF1-215ENST00000515516 IGKV1D-8A0A087WSZ0 117 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 LOC100506127A0A0U1RQW1 187 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 SRRM4A7MD48 611 aaKnown RBP10.54□□□□□ -0.72
TCOF1-215ENST00000515516 TUSC2O75896 110 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 ACTL6BO94805 426 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 AADACP22760 399 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 NFYAP23511 347 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-215ENST00000515516 SDC2P34741 201 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 UBE2KP61086 200 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 MXD1Q05195 221 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 TNXAQ16473 311 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 ACSM6Q6P461 480 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 CNIH2Q6PI25 160 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 LGALS14Q8TCE9 139 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 NUDCD2Q8WVJ2 157 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 COA4Q9NYJ1 87 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 MRPS7Q9Y2R9 242 aaKnown RBP10.54□□□□□ -0.72
TCOF1-215ENST00000515516 OR2W1Q9Y3N9 320 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 U3KQK5 164 aa10.54□□□□□ -0.72
TCOF1-215ENST00000515516 ANKRD34BA5PLL1 514 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 TMEM235A6NFC5 223 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 MSGN1A6NI15 193 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 FCGR3BO75015 233 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 ARPC4P59998 168 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 PRSS8Q16651 343 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 TATDN3Q17R31 274 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 IDNKQ5T6J7 187 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 ACOT12Q8WYK0 555 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 DDB2Q92466 427 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 C5orf30Q96GV9 206 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 USMG5Q96IX5 58 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 ASCL2Q99929 193 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 RSRP1Q9BUV0 290 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 RHBDL2Q9NX52 303 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 ETV7Q9Y603 341 aa10.53□□□□□ -0.72
TCOF1-215ENST00000515516 LINC00473A8K010 186 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 BRI3O95415 125 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 HLA-DQB1P01920 261 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 GP9P14770 177 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 SPNP16150 400 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 SCAND1P57086 179 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 NEDD8Q15843 81 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 IDO2Q6ZQW0 420 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 KCTD9Q7L273 389 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 ANKRD13BQ86YJ7 626 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 TINAGL1Q9GZM7 467 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-215ENST00000515516 ANXA10Q9UJ72 324 aa10.52□□□□□ -0.73
TCOF1-215ENST00000515516 RBMX2Q9Y388 322 aaKnown RBP10.52□□□□□ -0.73
TCOF1-215ENST00000515516 TRAV18A0A075B6X5 111 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 CLEC2LP0C7M8 214 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 OR9G9P0C7N8 305 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 APELAP0DMC3 54 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 SSBP2P81877 361 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-215ENST00000515516 CDK10Q15131 360 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 OR2B11Q5JQS5 317 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 MMD2Q8IY49 270 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 TCTEX1D2Q8WW35 142 aa10.51□□□□□ -0.73
TCOF1-215ENST00000515516 SRSF12Q8WXF0 261 aaKnown RBP10.51□□□□□ -0.73
TCOF1-215ENST00000515516 HSD17B10Q99714 261 aaKnown RBP10.51□□□□□ -0.73
TCOF1-215ENST00000515516 SPIN2AQ99865 258 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms