RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	TSNAX	Q99598	290 aa	Known RBP	5.99	□□□□□ -1.45
NR1I3-231	ENST00000512340	TXN2	Q99757	166 aa		5.99	□□□□□ -1.45
NR1I3-231	ENST00000512340	NAA50	Q9GZZ1	169 aa	Known RBP	5.99	□□□□□ -1.45
NR1I3-231	ENST00000512340	TOLLIP	Q9H0E2	274 aa		5.99	□□□□□ -1.45
NR1I3-231	ENST00000512340	OR2D2	Q9H210	308 aa		5.99	□□□□□ -1.45
NR1I3-231	ENST00000512340	GSN-AS1	Q9NRJ2	163 aa		5.99	□□□□□ -1.45
NR1I3-231	ENST00000512340	ZNF230	Q9UIE0	474 aa	Predicted RBP	5.99	□□□□□ -1.45
NR1I3-231	ENST00000512340	OR2W1	Q9Y3N9	320 aa		5.99	□□□□□ -1.45
NR1I3-231	ENST00000512340		H3BMQ9	156 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340		M0QZ24	198 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	SLC31A2	O15432	143 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	CREBL2	O60519	120 aa	Predicted RBP	5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	HPGDS	O60760	199 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	TBP	P20226	339 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	MDK	P21741	143 aa	Predicted RBP	5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	CD24	P25063	80 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	LGALS7	P47929	136 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	THBS3	P49746	956 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	ZNF134	P52741	427 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	SSBP1	Q04837	148 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	CATR1	Q13166	79 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	EBI3	Q14213	229 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	SMCO1	Q147U7	214 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	HERPUD1	Q15011	391 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	MMD	Q15546	238 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	MSMO1	Q15800	293 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	ABCA11P	Q4W5N1	156 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	LDLRAD2	Q5SZI1	272 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	SLC25A24	Q6NUK1	477 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	PDPN	Q86YL7	162 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	SNX29P2	Q8IUI4	249 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	CMTM1	Q8IZ96	169 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	H1FOO	Q8IZA3	346 aa	Predicted RBP	5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340		Q8N2B8	174 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	POC5	Q8NA72	575 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	OR4X2	Q8NGF9	303 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	OR6F1	Q8NGZ6	308 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	MCFD2	Q8NI22	146 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	MAFIP	Q8WZ33	124 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	FLYWCH2	Q96CP2	140 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	DIRAS2	Q96HU8	199 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	EAF1	Q96JC9	268 aa	Predicted RBP	5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	HSD17B10	Q99714	261 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	MRPL20	Q9BYC9	149 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	IFI27L2	Q9H2X8	130 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	MMP27	Q9H306	513 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	LIN7C	Q9NUP9	197 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	TAS2R8	Q9NYW2	309 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	OR1A1	Q9P1Q5	309 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	RNF150	Q9ULK6	438 aa		5.98	□□□□□ -1.45
NR1I3-231	ENST00000512340	MGAM2	Q2M2H8	2515 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	IGHV3-72	A0A0B4J1Y9	119 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	AP4M1	O00189	453 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	CTDSP2	O14595	271 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	NBR2	O15453	112 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	CHST1	O43916	411 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	SPDEF	O95238	335 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	EIF4E	P06730	217 aa	Known RBP	5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	FCER2	P06734	321 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	VSIG10L2	P0DP72	767 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	ELK1	P19419	428 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	PAX6	P26367	422 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	CD40LG	P29965	261 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	FCGR2C	P31995	323 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	KIR2DS2	P43631	304 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	RPS16	P62249	146 aa	Known RBP	5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	IL18	Q14116	193 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	VMA21	Q3ZAQ7	101 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	ZFP69	Q49AA0	526 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	RPL39P5	Q59GN2	51 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	TMEM65	Q6PI78	240 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	FAM131A	Q6UXB0	335 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	SLC35E3	Q7Z769	313 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	COMMD1	Q8N668	190 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	ZNF645	Q8N7E2	425 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	OR5AN1	Q8NGI8	311 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	DYNC2LI1	Q8TCX1	351 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	CD300LF	Q8TDQ1	290 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	CFHR4	Q92496	578 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	ABHD14B	Q96IU4	210 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	NABP2	Q9BQ15	211 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	TCEAL7	Q9BRU2	100 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	AGMAT	Q9BSE5	352 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	SLC35D1	Q9NTN3	355 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	EHF	Q9NZC4	300 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	A3GALT2	U3KPV4	340 aa		5.97	□□□□□ -1.45
NR1I3-231	ENST00000512340	IGKV1-6	A0A0C4DH72	117 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	ZNF736	B4DX44	427 aa	Predicted RBP	5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	GABARAP	H6UMI1	98 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	WIPF1	O43516	503 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	FBXO24	O75426	580 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	ACTL6B	O94805	426 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	PPY	P01298	95 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	HLA-DQB1	P01920	261 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	MB	P02144	154 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	CSF1	P09603	554 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	OR4E1	P0C645	316 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	VDAC1	P21796	283 aa		5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	NFYA	P23511	347 aa	Predicted RBP	5.96	□□□□□ -1.46
NR1I3-231	ENST00000512340	FAU	P35544	74 aa	Known RBP	5.96	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms