RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 TOR1AO14656 332 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 ST8SIA3O43173 380 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 TNFSF12O43508 249 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 PITX3O75364 302 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 SCAF4O95104 1147 aaKnown RBP7.41□□□□□ -1.22
NR1I3-230ENST00000511944 APOA2P02652 100 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 P0C879 139 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 GATA3P23771 443 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 CEACAM3P40198 252 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 RAB13P51153 203 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 LTC4SQ16873 150 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 RTL8BQ17RB0 113 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 PDPNQ86YL7 162 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 LYG1Q8N1E2 194 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 LILRB2Q8N423 598 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 C9orf62Q8N4C0 152 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 OR5AN1Q8NGI8 311 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 OR10X1Q8NGY0 326 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 OSR1Q8TAX0 266 aaPredicted RBP7.41□□□□□ -1.22
NR1I3-230ENST00000511944 SEC22AQ96IW7 307 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 OR10C1Q96KK4 312 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 GON7Q9BXV9 100 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 RNF150Q9ULK6 438 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 TNFSF18Q9UNG2 199 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 POMT1Q9Y6A1 747 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 LRRK2Q5S007 2527 aa7.41□□□□□ -1.22
NR1I3-230ENST00000511944 TRAV14DV4A0A0A6YYC5 116 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 MARCH11A6NNE9 402 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 LINC00473A8K010 186 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 ODF3BA8MYP8 253 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 SLC31A2O15432 143 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 DEDDO75618 318 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 HRASP01112 189 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 IGKV1-39P01597 117 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 IGKV1D-39P04432 117 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 NQO2P16083 231 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 LPAR6P43657 344 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 AKR1C2P52895 323 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 TAS2R30P59541 319 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 ERVK-16P61578 105 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 RPL30P62888 115 aaKnown RBP7.4□□□□□ -1.22
NR1I3-230ENST00000511944 ZNF816Q0VGE8 651 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-230ENST00000511944 PDLIM3Q53GG5 364 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-230ENST00000511944 MINOS1Q5TGZ0 78 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 BTNL3Q6UXE8 466 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 ACOT7LQ6ZUV0 252 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 ZNF546Q86UE3 836 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 FOXRED2Q8IWF2 684 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 FAM71E2Q8N5Q1 922 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 Q8N7P7 452 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 OR11H4Q8NGC9 324 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 CCDC140Q96MF4 163 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 FBXL7Q9UJT9 491 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 MINOS1-NBL1R4GNA1 71 aa7.4□□□□□ -1.22
NR1I3-230ENST00000511944 COL12A1Q99715 3063 aa7.4□□□□□ -1.23
NR1I3-230ENST00000511944 MEX3AA1L020 520 aaKnown RBP7.39□□□□□ -1.23
NR1I3-230ENST00000511944 E5RGE8 158 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 BUB1B-PAK6H3BSN5 160 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 IGKV1-5P01602 117 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 PVALBP20472 110 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-230ENST00000511944 NUP62P37198 522 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-230ENST00000511944 NKX2-1P43699 371 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-230ENST00000511944 GNG10P50151 68 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 BRWD1-AS2P59051 145 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 RAB32Q13637 225 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 DEFB113Q30KQ7 82 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 TMEM177Q53S58 311 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 RPL39P5Q59GN2 51 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 GPR157Q5UAW9 335 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 FAM53AQ6NSI3 398 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-230ENST00000511944 CCDC144NLQ6NUI1 221 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 TGIF2LXQ8IUE1 241 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 OR8H3Q8N146 312 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 INO80EQ8NBZ0 244 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-230ENST00000511944 RNASE11Q8TAA1 199 aaKnown RBP7.39□□□□□ -1.23
NR1I3-230ENST00000511944 AQP10Q96PS8 301 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 RAB40CQ96S21 281 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 RNF5Q99942 180 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 SIRPDQ9H106 197 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 SLA2Q9H6Q3 261 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 ONECUT1Q9UBC0 465 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 NSG2Q9Y328 171 aa7.39□□□□□ -1.23
NR1I3-230ENST00000511944 TBL2Q9Y4P3 447 aaKnown RBP7.39□□□□□ -1.23
NR1I3-230ENST00000511944 FXYD6-FXYD2A0A087WZ82 144 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 TRAV20A0A0B4J274 112 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 MPTX1A8MV57 137 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 LEUTXA8MZ59 168 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 H0YJW9 148 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 LY6LH3BQJ8 138 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 L7N2F9 121 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 RAMP3O60896 148 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 MED6O75586 246 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 S1PR2O95136 353 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 MBPP02686 304 aaPredicted RBP7.38□□□□□ -1.23
NR1I3-230ENST00000511944 GAPDHP04406 335 aaKnown RBP7.38□□□□□ -1.23
NR1I3-230ENST00000511944 CT45A6P0DMU7 189 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 CT45A5P0DMU8 189 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 CT45A7P0DMV0 189 aa7.38□□□□□ -1.23
NR1I3-230ENST00000511944 USF1P22415 310 aaPredicted RBP7.38□□□□□ -1.23
NR1I3-230ENST00000511944 ZFP36P26651 326 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms