RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 RAB3BP20337 219 aa11.81□□□□□ -0.52
TPM3-219ENST00000509409 CENPOQ9BU64 300 aa11.81□□□□□ -0.52
TPM3-219ENST00000509409 ATG5Q9H1Y0 275 aa11.81□□□□□ -0.52
TPM3-219ENST00000509409 COA4Q9NYJ1 87 aa11.81□□□□□ -0.52
TPM3-219ENST00000509409 BLOC1S6Q9UL45 172 aa11.81□□□□□ -0.52
TPM3-219ENST00000509409 A0A0B4J203 849 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 MSGN1A6NI15 193 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
TPM3-219ENST00000509409 J3QRK9 145 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 APELAP0DMC3 54 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 HIST1H1DP16402 221 aaKnown RBP11.8□□□□□ -0.52
TPM3-219ENST00000509409 RAB6AP20340 208 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 AADACP22760 399 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 HSPA13P48723 471 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 TBCEQ15813 527 aaPredicted RBP11.8□□□□□ -0.52
TPM3-219ENST00000509409 SSX1Q16384 188 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 TATDN3Q17R31 274 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 TMEM177Q53S58 311 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 MUC7Q8TAX7 377 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 ADTRPQ96IZ2 230 aa11.8□□□□□ -0.52
TPM3-219ENST00000509409 SHISA3A0PJX4 238 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 RAB27BO00194 218 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 MFNGO00587 321 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 MPPED1O15442 326 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 DIRAS3O95661 229 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 SYNJ2BPP57105 145 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 SSBP2P81877 361 aaPredicted RBP11.79□□□□□ -0.52
TPM3-219ENST00000509409 DEFA5Q01523 94 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 KLF5Q13887 457 aaPredicted RBP11.79□□□□□ -0.52
TPM3-219ENST00000509409 TNXAQ16473 311 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 C22orf42Q6IC83 251 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 IZUMO2Q6UXV1 221 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 TEX45Q8NA69 505 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 C5orf30Q96GV9 206 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 USMG5Q96IX5 58 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 DCUN1D5Q9BTE7 237 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 ST6GALNAC5Q9BVH7 336 aa11.79□□□□□ -0.52
TPM3-219ENST00000509409 TINAGL1Q9GZM7 467 aaPredicted RBP11.79□□□□□ -0.52
TPM3-219ENST00000509409 PEF1Q9UBV8 284 aaKnown RBP11.79□□□□□ -0.52
TPM3-219ENST00000509409 TRDV1A0A1B0GX56 115 aa11.78□□□□□ -0.52
TPM3-219ENST00000509409 CRYZL1O95825 349 aa11.78□□□□□ -0.52
TPM3-219ENST00000509409 IGLV1-51P01701 117 aa11.78□□□□□ -0.52
TPM3-219ENST00000509409 IGHV4-30-4P0DP06 118 aa11.78□□□□□ -0.52
TPM3-219ENST00000509409 DUTP33316 252 aaKnown RBP11.78□□□□□ -0.52
TPM3-219ENST00000509409 ARL6IP1Q15041 203 aa11.78□□□□□ -0.52
TPM3-219ENST00000509409 CDNFQ49AH0 187 aa11.78□□□□□ -0.52
TPM3-219ENST00000509409 OR9G4Q8NGQ1 327 aa11.78□□□□□ -0.52
TPM3-219ENST00000509409 ACOT12Q8WYK0 555 aa11.78□□□□□ -0.52
TPM3-219ENST00000509409 SMIM30A4D0T7 59 aa11.77□□□□□ -0.53
TPM3-219ENST00000509409 H0Y980 276 aa11.77□□□□□ -0.53
TPM3-219ENST00000509409 ACTL6BO94805 426 aa11.77□□□□□ -0.53
TPM3-219ENST00000509409 UBE2KP61086 200 aa11.77□□□□□ -0.53
TPM3-219ENST00000509409 PRSS8Q16651 343 aa11.77□□□□□ -0.53
TPM3-219ENST00000509409 RPEL1Q2QD12 228 aa11.77□□□□□ -0.53
TPM3-219ENST00000509409 IDO2Q6ZQW0 420 aa11.77□□□□□ -0.53
TPM3-219ENST00000509409 H1FOOQ8IZA3 346 aaPredicted RBP11.77□□□□□ -0.53
TPM3-219ENST00000509409 PALMDQ9NP74 551 aa11.77□□□□□ -0.53
TPM3-219ENST00000509409 NDUFB11Q9NX14 153 aa11.77□□□□□ -0.53
TPM3-219ENST00000509409 ELF5Q9UKW6 265 aaPredicted RBP11.77□□□□□ -0.53
TPM3-219ENST00000509409 DNAH7Q8WXX0 4024 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 LINC00473A8K010 186 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 TUSC2O75896 110 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 BRI3O95415 125 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 LYL1P12980 280 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 DTYMKP23919 212 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 CASC10Q5T4H9 136 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 Q8N1Y9 231 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 OSR1Q8TAX0 266 aaPredicted RBP11.76□□□□□ -0.53
TPM3-219ENST00000509409 PRELID3BQ9Y3B1 194 aa11.76□□□□□ -0.53
TPM3-219ENST00000509409 FCGR3BO75015 233 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 TRBV12-3P01733 135 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 CTXN2P0C2S0 81 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 NFYAP23511 347 aaPredicted RBP11.75□□□□□ -0.53
TPM3-219ENST00000509409 ATP5G2Q06055 141 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 DYRK1AQ13627 763 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 MRGPRG-AS1Q2M3A8 158 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 Q6ZS49 121 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 SRSF12Q8WXF0 261 aaKnown RBP11.75□□□□□ -0.53
TPM3-219ENST00000509409 DDB2Q92466 427 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 SNAPC3Q92966 411 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 TUBA4BQ9H853 241 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 ADAM30Q9UKF2 790 aa11.75□□□□□ -0.53
TPM3-219ENST00000509409 NOTOA8MTQ0 251 aa11.74□□□□□ -0.53
TPM3-219ENST00000509409 CREBL2O60519 120 aaPredicted RBP11.74□□□□□ -0.53
TPM3-219ENST00000509409 PRH1P02810 166 aa11.74□□□□□ -0.53
TPM3-219ENST00000509409 GALP22466 123 aa11.74□□□□□ -0.53
TPM3-219ENST00000509409 PSMB9P28065 219 aa11.74□□□□□ -0.53
TPM3-219ENST00000509409 RHOGP84095 191 aa11.74□□□□□ -0.53
TPM3-219ENST00000509409 OR2B11Q5JQS5 317 aa11.74□□□□□ -0.53
TPM3-219ENST00000509409 HACD4Q5VWC8 232 aa11.74□□□□□ -0.53
TPM3-219ENST00000509409 IL34Q6ZMJ4 242 aa11.74□□□□□ -0.53
TPM3-219ENST00000509409 ADAD2Q8NCV1 583 aaKnown RBP11.74□□□□□ -0.53
TPM3-219ENST00000509409 ZNF430Q9H8G1 570 aaPredicted RBP11.74□□□□□ -0.53
TPM3-219ENST00000509409 RAB26Q9ULW5 256 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms