RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 MARC2Q969Z3 335 aa11.67□□□□□ -0.54
PDLIM7-210ENST00000503827 OAZ3Q9UMX2 235 aa11.67□□□□□ -0.54
PDLIM7-210ENST00000503827 TRBV5-5A0A0J9YX44 114 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 GYG2O15488 501 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 FCGR2BP31994 310 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 GNGT1P63211 74 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 PRSS8Q16651 343 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 Q499Y3 187 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 DNAL1Q4LDG9 190 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 TMEM177Q53S58 311 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 SLC25A42Q86VD7 318 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 TTC9CQ8N5M4 171 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 TEX45Q8NA69 505 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 OR52I1Q8NGK6 324 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 SMIM19Q96E16 107 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 GALNT14Q96FL9 552 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 SPIN2AQ99865 258 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 SPAG8Q99932 426 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 RARRES2Q99969 163 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 SPIN2BQ9BPZ2 258 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 MAP6D1Q9H9H5 199 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 AMBNQ9NP70 447 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 GHRLQ9UBU3 117 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 FAT2Q9NYQ8 4349 aa11.66□□□□□ -0.54
PDLIM7-210ENST00000503827 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 ACTL6BO94805 426 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 LIMS3P0CW19 117 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 LIMS4P0CW20 117 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 FCGR1AP12314 374 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 HLA-DRB3P79483 266 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 TAGLNQ01995 201 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 RTL8BQ17RB0 113 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 CLEC19AQ6UXS0 136 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 Q96MT0 163 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 C11orf68Q9H3H3 251 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 RIMS4Q9H426 269 aaPredicted RBP11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 MGAT4AQ9UM21 535 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 AP4S1Q9Y587 144 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 ORC6Q9Y5N6 252 aa11.65□□□□□ -0.54
PDLIM7-210ENST00000503827 DYNC1H1Q14204 4646 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 DNAH2Q9P225 4427 aa11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 C11orf94C9JXX5 98 aa11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 OGG1O15527 345 aa11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 IGHV3-23P01764 117 aa11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 RRASP10301 218 aa11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 MFAP2P55001 183 aa11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 UBE2KP61086 200 aa11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 ZNF585BQ52M93 769 aa11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 TMPRSS11AQ6ZMR5 421 aa11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-210ENST00000503827 DNAH17Q9UFH2 4485 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 TRBV6-6A0A0A6YYG2 114 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 A0A1W2PPK0 400 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 DYNC1I1O14576 645 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 CREBL2O60519 120 aaPredicted RBP11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 SCTP09683 121 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 C8orf88P0DMB2 117 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 GABRB1P18505 474 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 YIF1BQ5BJH7 314 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 IDO2Q6ZQW0 420 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 CCDC140Q96MF4 163 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 UQCC2Q9BRT2 126 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 C6orf62Q9GZU0 229 aaPredicted RBP11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 C5orf66Q9H5L9 145 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 RDH8Q9NYR8 311 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 ZNF257Q9Y2Q1 563 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 RPL36Q9Y3U8 105 aaKnown RBP11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 DNAH11Q96DT5 4516 aa11.63□□□□□ -0.55
PDLIM7-210ENST00000503827 SAC3D1A6NKF1 404 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 RTL8CO15255 209 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 GSTT2P0CG29 244 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 GSTT2BP0CG30 244 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 TPBGQ13641 420 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 ODF3L2Q3SX64 289 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 ZIK1Q3SY52 487 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 OR2G6Q5TZ20 316 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 NKAIN3Q8N8D7 197 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 OR11H2Q8NH07 326 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 EEF1AKMT3Q96AZ1 226 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 CENPNQ96H22 339 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 MRPS18AQ9NVS2 196 aaKnown RBP11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 PLEKHJ1Q9NW61 149 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 BABAM2Q9NXR7 383 aa11.62□□□□□ -0.55
PDLIM7-210ENST00000503827 TRBV5-7A0A0A0MS05 114 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 MPTX1A8MV57 137 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 TSPAN4O14817 238 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 UBBP0CG47 229 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 GALP22466 123 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 HTR2CP28335 458 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 RPS11P62280 158 aaKnown RBP eCLIP11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 RPS27AP62979 156 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 MED21Q13503 144 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 OR5B3Q8NH48 314 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 SLC29A1Q99808 456 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 TMEM59Q9BXS4 323 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 OR2D2Q9H210 308 aa11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 ZNF430Q9H8G1 570 aaPredicted RBP11.61□□□□□ -0.55
PDLIM7-210ENST00000503827 SDHAF2Q9NX18 166 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms