RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ZMAT4Q9H898 229 aa9.05□□□□□ -0.96
NUDCD3-211ENST00000497978 SDHAF2Q9NX18 166 aa9.05□□□□□ -0.96
NUDCD3-211ENST00000497978 STUB1Q9UNE7 303 aa9.05□□□□□ -0.96
NUDCD3-211ENST00000497978 KCNK7Q9Y2U2 307 aa9.05□□□□□ -0.96
NUDCD3-211ENST00000497978 A0A075B6Q4 140 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 TRBV6-7A0A0A0MS04 114 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 IFITM5A6NNB3 132 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 IGLV2-23P01705 113 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 FRMD6-AS1P0C7T7 363 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 HIST1H1DP16402 221 aaKnown RBP9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 GNB3P16520 340 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 PLA2G7Q13093 441 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 ARFRP1Q13795 201 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 ARL6IP1Q15041 203 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 OVCH2Q7RTZ1 564 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 ADTRPQ96IZ2 230 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 CNBD2Q96M20 576 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 RCHY1Q96PM5 261 aa9.04□□□□□ -0.96
NUDCD3-211ENST00000497978 ANKRD34BA5PLL1 514 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 MFNGO00587 321 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 CRYGBP07316 175 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 RAB3BP20337 219 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 AADACP22760 399 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 OR10A3P58181 314 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 PJVKQ0ZLH3 352 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 SSX1Q16384 188 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 SRSF7Q16629 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 VMA21Q3ZAQ7 101 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 TMEM177Q53S58 311 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 BVESQ8NE79 360 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 MAFIPQ8WZ33 124 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 PHB2Q99623 299 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 NDUFB11Q9NX14 153 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 COA4Q9NYJ1 87 aa9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 ZNF230Q9UIE0 474 aaPredicted RBP9.03□□□□□ -0.96
NUDCD3-211ENST00000497978 TENM3Q9P273 2699 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 TRDV1A0A1B0GX56 115 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 TRIM64CA6NLI5 447 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 RAB27BO00194 218 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 BRI3O95415 125 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 TATDN3Q17R31 274 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 IZUMO2Q6UXV1 221 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 SGPP2Q8IWX5 399 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 TEX45Q8NA69 505 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 MUC7Q8TAX7 377 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 USMG5Q96IX5 58 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 TINAGL1Q9GZM7 467 aaPredicted RBP9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 ATG5Q9H1Y0 275 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 RYR3Q15413 4870 aa9.02□□□□□ -0.97
NUDCD3-211ENST00000497978 DNAH9Q9NYC9 4486 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 MSGN1A6NI15 193 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 SRRM4A7MD48 611 aaKnown RBP9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 H0Y980 276 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 MPPED1O15442 326 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 CREBL2O60519 120 aaPredicted RBP9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 IGLV1-51P01701 117 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 GALP22466 123 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 UBE2KP61086 200 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 SSBP2P81877 361 aaPredicted RBP9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 KLF5Q13887 457 aaPredicted RBP9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 TNXAQ16473 311 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 Q6ZS49 121 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 HAPLN4Q86UW8 402 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 H1FOOQ8IZA3 346 aaPredicted RBP9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 OR9G4Q8NGQ1 327 aa9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 OSR1Q8TAX0 266 aaPredicted RBP9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 PEF1Q9UBV8 284 aaKnown RBP9.01□□□□□ -0.97
NUDCD3-211ENST00000497978 A0A0B4J203 849 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 SHISA3A0PJX4 238 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 MRPS14O60783 128 aaKnown RBP9□□□□□ -0.97
NUDCD3-211ENST00000497978 ACTL6BO94805 426 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 CRYZL1O95825 349 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 CTXN2P0C2S0 81 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 IGHV4-30-4P0DP06 118 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 DTYMKP23919 212 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 DUTP33316 252 aaKnown RBP9□□□□□ -0.97
NUDCD3-211ENST00000497978 SYNJ2BPP57105 145 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 PRSS8Q16651 343 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 RPEL1Q2QD12 228 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 C22orf42Q6IC83 251 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 ZNF343Q6P1L6 599 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 ACOT12Q8WYK0 555 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 DDB2Q92466 427 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 C5orf30Q96GV9 206 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 DCUN1D5Q9BTE7 237 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 ST6GALNAC5Q9BVH7 336 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 PRELID3BQ9Y3B1 194 aa9□□□□□ -0.97
NUDCD3-211ENST00000497978 SCGNO76038 276 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 SLC22A5O76082 557 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 OR9G9P0C7N8 305 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 APELAP0DMC3 54 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 CD36P16671 472 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 GABARAPL2P60520 117 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 DYRK1AQ13627 763 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 CDNFQ49AH0 187 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 IDO2Q6ZQW0 420 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 ZNF645Q8N7E2 425 aa8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 SRSF12Q8WXF0 261 aaKnown RBP8.99□□□□□ -0.97
NUDCD3-211ENST00000497978 SNAPC3Q92966 411 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms