RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 TINAGL1Q9GZM7 467 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 PARP12Q9H0J9 701 aaKnown RBP12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 SLC35D1Q9NTN3 355 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 OR1A1Q9P1Q5 309 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 PEF1Q9UBV8 284 aaKnown RBP12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 SHISA3A0PJX4 238 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 IFITM5A6NNB3 132 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 SOCS1O15524 211 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 OR2A4O95047 310 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 SCTP09683 121 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 HES5Q5TA89 166 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 C22orf42Q6IC83 251 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 DRAXINQ8NBI3 349 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 RDH8Q9NYR8 311 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 RAB22AQ9UL26 194 aa12.87□□□□□ -0.35
TRAPPC3-207ENST00000497251 RYR2Q92736 4967 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 TMEM272A0A1B0GTI8 110 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 M0R1X1 148 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 CRYGBP07316 175 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 TMEM50BP56557 158 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 OR10A3P58181 314 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 MRPS15P82914 257 aaKnown RBP12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 RTL8BQ17RB0 113 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 LAX1Q8IWV1 398 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 OR5T1Q8NG75 326 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 SNAPC3Q92966 411 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 ADTRPQ96IZ2 230 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 PEMTQ9UBM1 199 aa12.86□□□□□ -0.35
TRAPPC3-207ENST00000497251 A0A0B4J203 849 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 RAB6AP20340 208 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 HAGHQ16775 308 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 TMEM177Q53S58 311 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 IL34Q6ZMJ4 242 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 TPRA1Q86W33 373 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 TEX45Q8NA69 505 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 ARHGAP5-AS1Q96IT6 56 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 PECRQ9BY49 303 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 TXNL4BQ9NX01 149 aaKnown RBP12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
TRAPPC3-207ENST00000497251 CREBL2O60519 120 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-207ENST00000497251 IGLV2-23P01705 113 aa12.84□□□□□ -0.35
TRAPPC3-207ENST00000497251 RPEL1Q2QD12 228 aa12.84□□□□□ -0.35
TRAPPC3-207ENST00000497251 OR10J5Q8NHC4 309 aa12.84□□□□□ -0.35
TRAPPC3-207ENST00000497251 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
TRAPPC3-207ENST00000497251 HDHD3Q9BSH5 251 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-207ENST00000497251 THAP7Q9BT49 309 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-207ENST00000497251 IGKV1-6A0A0C4DH72 117 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 ANKRD34BA5PLL1 514 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 FAM223BA6NKX1 122 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 NOTOA8MTQ0 251 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 SHOXO15266 292 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 FABP7O15540 132 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 CD3GP09693 182 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 GADD45AP24522 165 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 SYNJ2BPP57105 145 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 SSBP2P81877 361 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 VMA21Q3ZAQ7 101 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 PLAC9Q5JTB6 97 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 ZFAND6Q6FIF0 208 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 NR2C2APQ86WQ0 139 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 FAM223AQ8IWN6 122 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 BVESQ8NE79 360 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 RAB3CQ96E17 227 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 CABLES2Q9BTV7 478 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 SACSQ9NZJ4 4579 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 CSMD3Q7Z407 3707 aa12.83□□□□□ -0.36
TRAPPC3-207ENST00000497251 TRBV6-7A0A0A0MS04 114 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 METTL21EPA6NDL7 271 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 CSN3P07498 182 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 OR9G9P0C7N8 305 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 MECP2P51608 486 aaKnown RBP12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 UBE2KP61086 200 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 PLA2G7Q13093 441 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 OR10R2Q8NGX6 335 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 OSR1Q8TAX0 266 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 LYSTQ99698 3801 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 SDHAF2Q9NX18 166 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 COA4Q9NYJ1 87 aa12.82□□□□□ -0.36
TRAPPC3-207ENST00000497251 RAB27BO00194 218 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 JTBO76095 146 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 PJVKQ0ZLH3 352 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 DYRK1AQ13627 763 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 ARL6IP1Q15041 203 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 NEDD8Q15843 81 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 Q6ZS49 121 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 HAPLN4Q86UW8 402 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 SLC25A42Q86VD7 318 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 ADAD2Q8NCV1 583 aaKnown RBP12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 PHB2Q99623 299 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 SPIN2AQ99865 258 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 SPIN2BQ9BPZ2 258 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 OR2D2Q9H210 308 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 OR51E2Q9H255 320 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 SLC2A8Q9NY64 477 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 KCNK7Q9Y2U2 307 aa12.81□□□□□ -0.36
TRAPPC3-207ENST00000497251 DNAH1Q9P2D7 4330 aa12.8□□□□□ -0.36
TRAPPC3-207ENST00000497251 MSGN1A6NI15 193 aa12.8□□□□□ -0.36
TRAPPC3-207ENST00000497251 MFNGO00587 321 aa12.8□□□□□ -0.36
TRAPPC3-207ENST00000497251 TNFAIP8O95379 198 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms