RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 DHRS2Q13268 280 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 PIFOQ8TCI5 191 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 CD300LFQ8TDQ1 290 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 FN1P02751 2386 aaKnown RBP17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 ANK3Q12955 4377 aaKnown RBP17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 SFT2D2O95562 160 aa17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 IFNA2P01563 188 aa17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 HLA-AP01891 365 aaKnown RBP17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 IL5P05113 134 aa17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 SLC9A3R2Q15599 337 aa17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 RTL8BQ17RB0 113 aa17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 C11orf88Q6PI97 169 aa17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 OR52B4Q8NGK2 314 aa17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 TMEM222Q9H0R3 208 aa17.5■□□□□ 0.39
ECHDC3-205ENST00000496136 RBFOX2O43251 390 aaKnown RBP eCLIP17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 B3GALNT1O75752 331 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 SNRNP70P08621 437 aaKnown RBP17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 RRASP10301 218 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 SRD5A1P18405 259 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 KIR2DS2P43631 304 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 TMEM187Q14656 261 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 AANATQ16613 207 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 LYG2Q86SG7 212 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 PDPNQ86YL7 162 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 RITA1Q96K30 269 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 SEC22CQ9BRL7 303 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 FAM212BQ9NTI7 297 aaPredicted RBP17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 PRR13Q9NZ81 148 aa17.49■□□□□ 0.39
ECHDC3-205ENST00000496136 CRYZL1O95825 349 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 IGKV1D-33P01593 117 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 IGKV1-33P01594 117 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 UCP1P25874 307 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 LPAR6P43657 344 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 EBI3Q14213 229 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 LRRC75BQ2VPJ9 315 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 FBLN7Q53RD9 439 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 Q6YL49 198 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 THNSL2Q86YJ6 484 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 CASTOR1Q8WTX7 329 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 FLYWCH2Q96CP2 140 aaKnown RBP17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 PRAF2O60831 178 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 CDS2O95674 445 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 SERPINE2P07093 398 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 ANXA3P12429 323 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 OR4C13Q8NGP0 309 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 OR4S2Q8NH73 311 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 ZDHHC16Q969W1 377 aa17.48■□□□□ 0.39
ECHDC3-205ENST00000496136 A0A0B4J293 547 aa17.47■□□□□ 0.39
ECHDC3-205ENST00000496136 HPRT1P00492 218 aa17.47■□□□□ 0.39
ECHDC3-205ENST00000496136 FAM106CPP0CH98 169 aa17.47■□□□□ 0.39
ECHDC3-205ENST00000496136 IER3P46695 156 aa17.47■□□□□ 0.39
ECHDC3-205ENST00000496136 HES1Q14469 280 aa17.47■□□□□ 0.39
ECHDC3-205ENST00000496136 TATDN3Q17R31 274 aa17.47■□□□□ 0.39
ECHDC3-205ENST00000496136 ANKRD55Q3KP44 614 aa17.47■□□□□ 0.39
ECHDC3-205ENST00000496136 DHRS7BQ6IAN0 325 aaPredicted RBP17.47■□□□□ 0.39
ECHDC3-205ENST00000496136 EAF1Q96JC9 268 aaPredicted RBP17.47■□□□□ 0.39
ECHDC3-205ENST00000496136 DUS4LO95620 317 aaKnown RBP17.46■□□□□ 0.39
ECHDC3-205ENST00000496136 MOSP00540 346 aa17.46■□□□□ 0.39
ECHDC3-205ENST00000496136 HNF4GQ14541 408 aa17.46■□□□□ 0.39
ECHDC3-205ENST00000496136 TMEM177Q53S58 311 aa17.46■□□□□ 0.39
ECHDC3-205ENST00000496136 OR2T10Q8NGZ9 312 aa17.46■□□□□ 0.39
ECHDC3-205ENST00000496136 LHFPL5Q8TAF8 219 aa17.46■□□□□ 0.39
ECHDC3-205ENST00000496136 ZNF431Q8TF32 576 aaPredicted RBP17.46■□□□□ 0.39
ECHDC3-205ENST00000496136 TEP1Q99973 2627 aaKnown RBP17.46■□□□□ 0.39
ECHDC3-205ENST00000496136 PLEKHA2Q9HB19 425 aa17.46■□□□□ 0.39
ECHDC3-205ENST00000496136 H3BUX3 64 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 S1PR2O95136 353 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 IGKV1-39P01597 117 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 IGKV1D-39P04432 117 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 RPS16P62249 146 aaKnown RBP17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 CBX3Q13185 183 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 SCGB2A2Q13296 93 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 LIAT1Q6ZQX7 453 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 SIGLECL1Q8N7X8 197 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 TMEM56Q96MV1 263 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 TMEM56-RWDD3S4R434 201 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 A0A0A6YYJ9 748 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 SRRM4A7MD48 611 aaKnown RBP17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 RPA2P15927 270 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 OSR1Q8TAX0 266 aaPredicted RBP17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 MITD1Q8WV92 249 aa17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 GPN1Q9HCN4 374 aaPredicted RBP17.45■□□□□ 0.38
ECHDC3-205ENST00000496136 SHOXO15266 292 aa17.44■□□□□ 0.38
ECHDC3-205ENST00000496136 IGHV4-59P01825 116 aa17.44■□□□□ 0.38
ECHDC3-205ENST00000496136 SELENOHQ8IZQ5 122 aaKnown RBP17.44■□□□□ 0.38
ECHDC3-205ENST00000496136 Q8N6K4 173 aa17.44■□□□□ 0.38
ECHDC3-205ENST00000496136 RNF5Q99942 180 aa17.44■□□□□ 0.38
ECHDC3-205ENST00000496136 SNRPGP15A8MWD9 76 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 CRLF1O75462 422 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 LGALS7P47929 136 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 TMEM268Q5VZI3 342 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 LIN54Q6MZP7 749 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 ZNF695Q8IW36 515 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 LGI3Q8N145 548 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 LRTM2Q8N967 370 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 HARBI1Q96MB7 349 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 C7orf66A4D0T2 115 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 CREBL2O60519 120 aaPredicted RBP17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 KRASP01116 189 aa17.43■□□□□ 0.38
ECHDC3-205ENST00000496136 TMEM11P17152 192 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms