RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 METTL21EPA6NDL7 271 aa14.12□□□□□ -0.15
CLCNKA-207ENST00000495784 RAB27BO00194 218 aa14.12□□□□□ -0.15
CLCNKA-207ENST00000495784 RRASP10301 218 aa14.12□□□□□ -0.15
CLCNKA-207ENST00000495784 RAB6AP20340 208 aa14.12□□□□□ -0.15
CLCNKA-207ENST00000495784 SSX1Q16384 188 aa14.12□□□□□ -0.15
CLCNKA-207ENST00000495784 TMEM177Q53S58 311 aa14.12□□□□□ -0.15
CLCNKA-207ENST00000495784 PHB2Q99623 299 aa14.12□□□□□ -0.15
CLCNKA-207ENST00000495784 CENPOQ9BU64 300 aa14.12□□□□□ -0.15
CLCNKA-207ENST00000495784 COA4Q9NYJ1 87 aa14.12□□□□□ -0.15
CLCNKA-207ENST00000495784 IGLV1-51P01701 117 aa14.11□□□□□ -0.15
CLCNKA-207ENST00000495784 AADACP22760 399 aa14.11□□□□□ -0.15
CLCNKA-207ENST00000495784 VMA21Q3ZAQ7 101 aa14.11□□□□□ -0.15
CLCNKA-207ENST00000495784 C5orf30Q96GV9 206 aa14.11□□□□□ -0.15
CLCNKA-207ENST00000495784 ADTRPQ96IZ2 230 aa14.11□□□□□ -0.15
CLCNKA-207ENST00000495784 CNBD2Q96M20 576 aa14.11□□□□□ -0.15
CLCNKA-207ENST00000495784 TINAGL1Q9GZM7 467 aaPredicted RBP14.11□□□□□ -0.15
CLCNKA-207ENST00000495784 NDUFB11Q9NX14 153 aa14.11□□□□□ -0.15
CLCNKA-207ENST00000495784 SHISA3A0PJX4 238 aa14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 SRRM4A7MD48 611 aaKnown RBP14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 BRI3O95415 125 aa14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 APELAP0DMC3 54 aa14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 RAB3BP20337 219 aa14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 HSPA13P48723 471 aa14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 KLF5Q13887 457 aaPredicted RBP14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 IZUMO2Q6UXV1 221 aa14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 SGPP2Q8IWX5 399 aa14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 OR9G4Q8NGQ1 327 aa14.1□□□□□ -0.15
CLCNKA-207ENST00000495784 A0A0B4J203 849 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 TRDV1A0A1B0GX56 115 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 MSGN1A6NI15 193 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 MPPED1O15442 326 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 CRYZL1O95825 349 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 IGHV4-30-4P0DP06 118 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 SYNJ2BPP57105 145 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 DEFA5Q01523 94 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 ARL6IP1Q15041 203 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 TNXAQ16473 311 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 H1FOOQ8IZA3 346 aaPredicted RBP14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 TEX45Q8NA69 505 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 USMG5Q96IX5 58 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 ATG5Q9H1Y0 275 aa14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 PEF1Q9UBV8 284 aaKnown RBP14.09□□□□□ -0.15
CLCNKA-207ENST00000495784 DUTP33316 252 aaKnown RBP14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 UBE2KP61086 200 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 PRSS8Q16651 343 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 TATDN3Q17R31 274 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 CASC10Q5T4H9 136 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 C22orf42Q6IC83 251 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 ZNF343Q6P1L6 599 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 IDO2Q6ZQW0 420 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 Q6ZS49 121 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 Q8N1Y9 231 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 ACOT12Q8WYK0 555 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 DDB2Q92466 427 aa14.08□□□□□ -0.16
CLCNKA-207ENST00000495784 IGKV1D-8A0A087WSZ0 117 aa14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 H0Y980 276 aa14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 ACTL6BO94805 426 aa14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 OR9G9P0C7N8 305 aa14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 DYRK1AQ13627 763 aa14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 RPEL1Q2QD12 228 aa14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 ADAD2Q8NCV1 583 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 OSR1Q8TAX0 266 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 SRSF12Q8WXF0 261 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 PALMDQ9NP74 551 aa14.07□□□□□ -0.16
CLCNKA-207ENST00000495784 SMIM30A4D0T7 59 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 LINC00473A8K010 186 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 J3QRK9 145 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 CREBL2O60519 120 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 TRBV12-3P01733 135 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 LYL1P12980 280 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 GALP22466 123 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 DTYMKP23919 212 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 MRGPRG-AS1Q2M3A8 158 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 TM2D3Q9BRN9 247 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 DCUN1D5Q9BTE7 237 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 ST6GALNAC5Q9BVH7 336 aa14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 ELF5Q9UKW6 265 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-207ENST00000495784 A8MZ25 164 aa14.05□□□□□ -0.16
CLCNKA-207ENST00000495784 CDNFQ49AH0 187 aa14.05□□□□□ -0.16
CLCNKA-207ENST00000495784 IL34Q6ZMJ4 242 aa14.05□□□□□ -0.16
CLCNKA-207ENST00000495784 NR2C2APQ86WQ0 139 aa14.05□□□□□ -0.16
CLCNKA-207ENST00000495784 SNAPC3Q92966 411 aa14.05□□□□□ -0.16
CLCNKA-207ENST00000495784 C19orf73Q9NVV2 129 aa14.05□□□□□ -0.16
CLCNKA-207ENST00000495784 ADAM30Q9UKF2 790 aa14.05□□□□□ -0.16
CLCNKA-207ENST00000495784 FCGR3BO75015 233 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 OR2A4O95047 310 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 CTXN2P0C2S0 81 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 CD36P16671 472 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 RHOGP84095 191 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 CDK10Q15131 360 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 LCN12Q6JVE5 192 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 KCTD9Q7L273 389 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 GTSCR1Q86UQ5 136 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 ZNF645Q8N7E2 425 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 CITED4Q96RK1 184 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 SPIN2AQ99865 258 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 SPIN2BQ9BPZ2 258 aa14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 ZNF430Q9H8G1 570 aaPredicted RBP14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 MRPS7Q9Y2R9 242 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-207ENST00000495784 PRELID3BQ9Y3B1 194 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms