RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 DYRK1AQ13627 763 aa17.72■□□□□ 0.43
COL27A1-208ENST00000494780 HES5Q5TA89 166 aa17.72■□□□□ 0.43
COL27A1-208ENST00000494780 C5orf30Q96GV9 206 aa17.72■□□□□ 0.43
COL27A1-208ENST00000494780 MGLLQ99685 303 aa17.72■□□□□ 0.43
COL27A1-208ENST00000494780 COA4Q9NYJ1 87 aa17.72■□□□□ 0.43
COL27A1-208ENST00000494780 SIGLEC8Q9NYZ4 499 aa17.72■□□□□ 0.43
COL27A1-208ENST00000494780 LCE6AA0A183 80 aa17.71■□□□□ 0.43
COL27A1-208ENST00000494780 TEX45Q8NA69 505 aa17.71■□□□□ 0.43
COL27A1-208ENST00000494780 OR10R2Q8NGX6 335 aa17.71■□□□□ 0.43
COL27A1-208ENST00000494780 ADTRPQ96IZ2 230 aa17.71■□□□□ 0.43
COL27A1-208ENST00000494780 PHB2Q99623 299 aa17.71■□□□□ 0.43
COL27A1-208ENST00000494780 SPATA25Q9BR10 227 aa17.71■□□□□ 0.43
COL27A1-208ENST00000494780 CENPOQ9BU64 300 aa17.71■□□□□ 0.43
COL27A1-208ENST00000494780 RBM7Q9Y580 266 aaKnown RBP17.71■□□□□ 0.43
COL27A1-208ENST00000494780 MSGN1A6NI15 193 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 MFNGO00587 321 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 GADD45AP24522 165 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 AQP4P55087 323 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 UBE2KP61086 200 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 DEFA5Q01523 94 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 MRGPRG-AS1Q2M3A8 158 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 VMA21Q3ZAQ7 101 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 ZFAND6Q6FIF0 208 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 LCN12Q6JVE5 192 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 PRSS48Q7RTY5 328 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 GINS4Q9BRT9 223 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 CCDC90BQ9GZT6 254 aa17.7■□□□□ 0.42
COL27A1-208ENST00000494780 PDCD5O14737 125 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 TRBV12-3P01733 135 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 CSN3P07498 182 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 PRSS8Q16651 343 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 RPEL1Q2QD12 228 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 GTSCR1Q86UQ5 136 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 Q8N402 240 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 ADAD2Q8NCV1 583 aaKnown RBP17.69■□□□□ 0.42
COL27A1-208ENST00000494780 DDB2Q92466 427 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 SNAPC3Q92966 411 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 THAP7Q9BT49 309 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-208ENST00000494780 NKX1-2Q9UD57 310 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-208ENST00000494780 ZNF230Q9UIE0 474 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-208ENST00000494780 RYR2Q92736 4967 aa17.69■□□□□ 0.42
COL27A1-208ENST00000494780 RAB27BO00194 218 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 OR2A4O95047 310 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 OR9G9P0C7N8 305 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 APELAP0DMC3 54 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 HIST1H1DP16402 221 aaKnown RBP17.68■□□□□ 0.42
COL27A1-208ENST00000494780 GNB3P16520 340 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 RAB6AP20340 208 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 CRHBPP24387 322 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 DUTP33316 252 aaKnown RBP17.68■□□□□ 0.42
COL27A1-208ENST00000494780 TNXAQ16473 311 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 HAGHQ16775 308 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 MAFIPQ8WZ33 124 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 ADAM30Q9UKF2 790 aa17.68■□□□□ 0.42
COL27A1-208ENST00000494780 A0A0B4J203 849 aa17.67■□□□□ 0.42
COL27A1-208ENST00000494780 TRAV1-2A0A0B4J238 106 aa17.67■□□□□ 0.42
COL27A1-208ENST00000494780 MAP2K4P45985 399 aa17.67■□□□□ 0.42
COL27A1-208ENST00000494780 Q6ZS49 121 aa17.67■□□□□ 0.42
COL27A1-208ENST00000494780 H1FOOQ8IZA3 346 aaPredicted RBP17.67■□□□□ 0.42
COL27A1-208ENST00000494780 OSR1Q8TAX0 266 aaPredicted RBP17.67■□□□□ 0.42
COL27A1-208ENST00000494780 SRSF12Q8WXF0 261 aaKnown RBP17.67■□□□□ 0.42
COL27A1-208ENST00000494780 TUBA4BQ9H853 241 aa17.67■□□□□ 0.42
COL27A1-208ENST00000494780 GAR1Q9NY12 217 aaKnown RBP17.67■□□□□ 0.42
COL27A1-208ENST00000494780 PEMTQ9UBM1 199 aa17.67■□□□□ 0.42
COL27A1-208ENST00000494780 A0A075B6Q4 140 aa17.66■□□□□ 0.42
COL27A1-208ENST00000494780 IFITM5A6NNB3 132 aa17.66■□□□□ 0.42
COL27A1-208ENST00000494780 MPPED1O15442 326 aa17.66■□□□□ 0.42
COL27A1-208ENST00000494780 RBMXL2O75526 392 aaKnown RBP17.66■□□□□ 0.42
COL27A1-208ENST00000494780 CRYZL1O95825 349 aa17.66■□□□□ 0.42
COL27A1-208ENST00000494780 TALDO1P37837 337 aa17.66■□□□□ 0.42
COL27A1-208ENST00000494780 OR2K2Q8NGT1 345 aa17.66■□□□□ 0.42
COL27A1-208ENST00000494780 NRG4Q8WWG1 115 aa17.66■□□□□ 0.42
COL27A1-208ENST00000494780 METTL21EPA6NDL7 271 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 FAM223BA6NKX1 122 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 LINC00473A8K010 186 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 AIREO43918 545 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 IFNA6P05013 189 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 MECP2P51608 486 aaKnown RBP17.65■□□□□ 0.42
COL27A1-208ENST00000494780 OR10A3P58181 314 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 ARFRP1Q13795 201 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 FAM223AQ8IWN6 122 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 ACOT12Q8WYK0 555 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 AKIP1Q9NQ31 210 aa17.65■□□□□ 0.42
COL27A1-208ENST00000494780 CREBL2O60519 120 aaPredicted RBP17.64■□□□□ 0.41
COL27A1-208ENST00000494780 RHOGP84095 191 aa17.64■□□□□ 0.41
COL27A1-208ENST00000494780 ARL6IP1Q15041 203 aa17.64■□□□□ 0.41
COL27A1-208ENST00000494780 TBCEQ15813 527 aaPredicted RBP17.64■□□□□ 0.41
COL27A1-208ENST00000494780 SSX1Q16384 188 aa17.64■□□□□ 0.41
COL27A1-208ENST00000494780 IDO2Q6ZQW0 420 aa17.64■□□□□ 0.41
COL27A1-208ENST00000494780 TNCP24821 2201 aa17.64■□□□□ 0.41
COL27A1-208ENST00000494780 TRBV9A0A0B4J1U6 114 aa17.63■□□□□ 0.41
COL27A1-208ENST00000494780 SHISA3A0PJX4 238 aa17.63■□□□□ 0.41
COL27A1-208ENST00000494780 IZUMO1RA6ND01 250 aa17.63■□□□□ 0.41
COL27A1-208ENST00000494780 MYL9P24844 172 aa17.63■□□□□ 0.41
COL27A1-208ENST00000494780 ATP5G2Q06055 141 aa17.63■□□□□ 0.41
COL27A1-208ENST00000494780 EXOSC2Q13868 293 aaKnown RBP17.63■□□□□ 0.41
COL27A1-208ENST00000494780 CDK10Q15131 360 aa17.63■□□□□ 0.41
COL27A1-208ENST00000494780 ZNF367Q7RTV3 350 aa17.63■□□□□ 0.41
COL27A1-208ENST00000494780 SPIN2AQ99865 258 aa17.63■□□□□ 0.41
COL27A1-208ENST00000494780 SPIN2BQ9BPZ2 258 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms