RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 ADTRPQ96IZ2 230 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 PHB2Q99623 299 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 TINAGL1Q9GZM7 467 aaPredicted RBP12.73□□□□□ -0.37
PTPRU-208ENST00000493601 VCX3BQ9H321 246 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 COA4Q9NYJ1 87 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 A0A075B6Q4 140 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 IFITM5A6NNB3 132 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 LYL1P12980 280 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 KLF5Q13887 457 aaPredicted RBP12.72□□□□□ -0.37
PTPRU-208ENST00000493601 VMA21Q3ZAQ7 101 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 BVESQ8NE79 360 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 OR9G4Q8NGQ1 327 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 MAFIPQ8WZ33 124 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 C5orf30Q96GV9 206 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 USMG5Q96IX5 58 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 NDUFB11Q9NX14 153 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 BLOC1S6Q9UL45 172 aa12.72□□□□□ -0.37
PTPRU-208ENST00000493601 METTL21EPA6NDL7 271 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 A8MZ25 164 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 RAB27BO00194 218 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 TALDO1P37837 337 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 HSPA13P48723 471 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 SYNJ2BPP57105 145 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 OR10A3P58181 314 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 UBE2KP61086 200 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 ARFRP1Q13795 201 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 SSX1Q16384 188 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 ZNF343Q6P1L6 599 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 Q8N1Y9 231 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 TEX45Q8NA69 505 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 PALMDQ9NP74 551 aa12.71□□□□□ -0.37
PTPRU-208ENST00000493601 PEF1Q9UBV8 284 aaKnown RBP12.71□□□□□ -0.37
PTPRU-208ENST00000493601 ZNF230Q9UIE0 474 aaPredicted RBP12.71□□□□□ -0.37
PTPRU-208ENST00000493601 H0Y980 276 aa12.7□□□□□ -0.38
PTPRU-208ENST00000493601 CREBL2O60519 120 aaPredicted RBP12.7□□□□□ -0.38
PTPRU-208ENST00000493601 CRYZL1O95825 349 aa12.7□□□□□ -0.38
PTPRU-208ENST00000493601 RAB3BP20337 219 aa12.7□□□□□ -0.38
PTPRU-208ENST00000493601 ARL6IP1Q15041 203 aa12.7□□□□□ -0.38
PTPRU-208ENST00000493601 Q6ZS49 121 aa12.7□□□□□ -0.38
PTPRU-208ENST00000493601 H1FOOQ8IZA3 346 aaPredicted RBP12.7□□□□□ -0.38
PTPRU-208ENST00000493601 DDB2Q92466 427 aa12.7□□□□□ -0.38
PTPRU-208ENST00000493601 CITED4Q96RK1 184 aa12.7□□□□□ -0.38
PTPRU-208ENST00000493601 DNAH7Q8WXX0 4024 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 SRRM4A7MD48 611 aaKnown RBP12.69□□□□□ -0.38
PTPRU-208ENST00000493601 MPPED1O15442 326 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 OR9G9P0C7N8 305 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 APELAP0DMC3 54 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 DUTP33316 252 aaKnown RBP12.69□□□□□ -0.38
PTPRU-208ENST00000493601 DEFA5Q01523 94 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 DYRK1AQ13627 763 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 TNXAQ16473 311 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 PRSS8Q16651 343 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 TATDN3Q17R31 274 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 RPEL1Q2QD12 228 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 LCN12Q6JVE5 192 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 ADAD2Q8NCV1 583 aaKnown RBP12.69□□□□□ -0.38
PTPRU-208ENST00000493601 OSR1Q8TAX0 266 aaPredicted RBP12.69□□□□□ -0.38
PTPRU-208ENST00000493601 C19orf73Q9NVV2 129 aa12.69□□□□□ -0.38
PTPRU-208ENST00000493601 A0A0B4J203 849 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 TRDV1A0A1B0GX56 115 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 SHISA3A0PJX4 238 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 MSGN1A6NI15 193 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 OR2A4O95047 310 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 GALP22466 123 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 DTYMKP23919 212 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 MRGPRG-AS1Q2M3A8 158 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 IZUMO2Q6UXV1 221 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 IL34Q6ZMJ4 242 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 IDO2Q6ZQW0 420 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 GTSCR1Q86UQ5 136 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 SRSF12Q8WXF0 261 aaKnown RBP12.68□□□□□ -0.38
PTPRU-208ENST00000493601 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 ISOC1Q96CN7 298 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 CNBD2Q96M20 576 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 ATG5Q9H1Y0 275 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 SIGLEC8Q9NYZ4 499 aa12.68□□□□□ -0.38
PTPRU-208ENST00000493601 FAM223BA6NKX1 122 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 LINC00473A8K010 186 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 ACTL6BO94805 426 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 TRBV12-3P01733 135 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 FAM223AQ8IWN6 122 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 Q8N402 240 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 ZNF645Q8N7E2 425 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 SNAPC3Q92966 411 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 SPIN2AQ99865 258 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 SPIN2BQ9BPZ2 258 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 PEMTQ9UBM1 199 aa12.67□□□□□ -0.38
PTPRU-208ENST00000493601 TNCP24821 2201 aa12.66□□□□□ -0.38
PTPRU-208ENST00000493601 CD36P16671 472 aa12.66□□□□□ -0.38
PTPRU-208ENST00000493601 RHOGP84095 191 aa12.66□□□□□ -0.38
PTPRU-208ENST00000493601 EXOSC2Q13868 293 aaKnown RBP12.66□□□□□ -0.38
PTPRU-208ENST00000493601 CDK10Q15131 360 aa12.66□□□□□ -0.38
PTPRU-208ENST00000493601 C22orf42Q6IC83 251 aa12.66□□□□□ -0.38
PTPRU-208ENST00000493601 KCTD9Q7L273 389 aa12.66□□□□□ -0.38
PTPRU-208ENST00000493601 SPATA25Q9BR10 227 aa12.66□□□□□ -0.38
PTPRU-208ENST00000493601 ZNF430Q9H8G1 570 aaPredicted RBP12.66□□□□□ -0.38
PTPRU-208ENST00000493601 MRPS7Q9Y2R9 242 aaKnown RBP12.66□□□□□ -0.38
PTPRU-208ENST00000493601 PRELID3BQ9Y3B1 194 aa12.66□□□□□ -0.38
PTPRU-208ENST00000493601 IGKV1D-8A0A087WSZ0 117 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms