RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 OSR1Q8TAX0 266 aaPredicted RBP9.59□□□□□ -0.87
COL6A1-205ENST00000492851 CNBD2Q96M20 576 aa9.59□□□□□ -0.87
COL6A1-205ENST00000492851 DNAH9Q9NYC9 4486 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 H0Y980 276 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 IGLV2-23P01705 113 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 DTYMKP23919 212 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 LINC00205P59089 165 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 GABARAPL2P60520 117 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 UBE2KP61086 200 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 IZUMO2Q6UXV1 221 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 BVESQ8NE79 360 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 PHB2Q99623 299 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 TINAGL1Q9GZM7 467 aaPredicted RBP9.58□□□□□ -0.88
COL6A1-205ENST00000492851 ATG5Q9H1Y0 275 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 DCSTAMPQ9H295 470 aa9.58□□□□□ -0.88
COL6A1-205ENST00000492851 PEF1Q9UBV8 284 aaKnown RBP9.58□□□□□ -0.88
COL6A1-205ENST00000492851 A0A075B6Q4 140 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 ACTL6BO94805 426 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 IGLV1-51P01701 117 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 FRMD6-AS1P0C7T7 363 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 FGF9P31371 208 aaPredicted RBP9.57□□□□□ -0.88
COL6A1-205ENST00000492851 DUTP33316 252 aaKnown RBP9.57□□□□□ -0.88
COL6A1-205ENST00000492851 OR10A3P58181 314 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 KLF5Q13887 457 aaPredicted RBP9.57□□□□□ -0.88
COL6A1-205ENST00000492851 FAM209BQ5JX69 171 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 TPRA1Q86W33 373 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 SGPP2Q8IWX5 399 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 ZNF230Q9UIE0 474 aaPredicted RBP9.57□□□□□ -0.88
COL6A1-205ENST00000492851 PRELID3BQ9Y3B1 194 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 NBEAL2Q6ZNJ1 2754 aa9.57□□□□□ -0.88
COL6A1-205ENST00000492851 A0A0B4J203 849 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 MSGN1A6NI15 193 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 NOTOA8MTQ0 251 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 A8MZ25 164 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 MPPED1O15442 326 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 CD36P16671 472 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 PJVKQ0ZLH3 352 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 PLA2G7Q13093 441 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 PRSS8Q16651 343 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 CDNFQ49AH0 187 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 HACD4Q5VWC8 232 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 C22orf42Q6IC83 251 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 ZNF343Q6P1L6 599 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 SBSPONQ8IVN8 264 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 H1FOOQ8IZA3 346 aaPredicted RBP9.56□□□□□ -0.88
COL6A1-205ENST00000492851 OR9G4Q8NGQ1 327 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 DDB2Q92466 427 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 FCGR1BQ92637 280 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 SNAPC3Q92966 411 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 RCHY1Q96PM5 261 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 SPIN2AQ99865 258 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 SPIN2BQ9BPZ2 258 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 DCUN1D5Q9BTE7 237 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 RSRP1Q9BUV0 290 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 YTHDF1Q9BYJ9 559 aaKnown RBP9.56□□□□□ -0.88
COL6A1-205ENST00000492851 Q9H521 79 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 COA4Q9NYJ1 87 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 SIGLEC8Q9NYZ4 499 aa9.56□□□□□ -0.88
COL6A1-205ENST00000492851 MRPS7Q9Y2R9 242 aaKnown RBP9.56□□□□□ -0.88
COL6A1-205ENST00000492851 SRRM4A7MD48 611 aaKnown RBP9.55□□□□□ -0.88
COL6A1-205ENST00000492851 AIREO43918 545 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 CRYZL1O95825 349 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 OR9G9P0C7N8 305 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 SSBP2P81877 361 aaPredicted RBP9.55□□□□□ -0.88
COL6A1-205ENST00000492851 UBE2UQ5VVX9 321 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 CNIH2Q6PI25 160 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 SLC25A42Q86VD7 318 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 MMD2Q8IY49 270 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 ZNF645Q8N7E2 425 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 VSTM2AQ8TAG5 236 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 ST6GALNAC5Q9BVH7 336 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 PEMTQ9UBM1 199 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 SSR3Q9UNL2 185 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 OR2W1Q9Y3N9 320 aa9.55□□□□□ -0.88
COL6A1-205ENST00000492851 SHISA3A0PJX4 238 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 ANKRD34BA5PLL1 514 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 FAM223BA6NKX1 122 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 OR2A4O95047 310 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 HLA-DQB1P01920 261 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 SCAND1P57086 179 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 CDK10Q15131 360 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 TNXAQ16473 311 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 RPEL1Q2QD12 228 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 OVCH2Q7RTZ1 564 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 FAM223AQ8IWN6 122 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 MUC7Q8TAX7 377 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 SRSF12Q8WXF0 261 aaKnown RBP9.54□□□□□ -0.88
COL6A1-205ENST00000492851 ACOT12Q8WYK0 555 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 MAFIPQ8WZ33 124 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 HSD17B10Q99714 261 aaKnown RBP9.54□□□□□ -0.88
COL6A1-205ENST00000492851 AIFM2Q9BRQ8 373 aa9.54□□□□□ -0.88
COL6A1-205ENST00000492851 TRIM64CA6NLI5 447 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 LINC00473A8K010 186 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 TMEM127O75204 238 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 TUSC2O75896 110 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 SYNJ2BPP57105 145 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 GNG2P59768 71 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 ATP5G2Q06055 141 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 LCN12Q6JVE5 192 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 KCTD9Q7L273 389 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms