RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 PYHIN1Q6K0P9 492 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ZNF66Q6ZN08 573 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 OR6F1Q8NGZ6 308 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TCTEX1D2Q8WW35 142 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 FCAMRQ8WWV6 532 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 MOB3AQ96BX8 217 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 GON7Q9BXV9 100 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 PARP11Q9NR21 331 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TAS2R8Q9NYW2 309 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 KLK11Q9UBX7 282 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 MTFP1Q9UDX5 166 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ZNF580Q9UK33 172 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TCRBV4S1A1TA0A5B7 111 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 GABARAPH6UMI1 98 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ATP6V0E1O15342 81 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 FCGR3BO75015 233 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 IGLV2-23P01705 113 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 VDAC1P21796 283 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TSPAN5P62079 268 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 DGCR2P98153 550 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 IL18Q14116 193 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 OR2B11Q5JQS5 317 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TREML4Q6UXN2 200 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 MFSD4AQ8N468 514 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 COMMD1Q8N668 190 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 BORCS5Q969J3 196 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CLCC1Q96S66 551 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 FXYD6Q9H0Q3 95 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TPSG1Q9NRR2 321 aa12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TSSC4Q9Y5U2 329 aaPredicted RBP12.81□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 M0QYG6 137 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 FCN1O00602 326 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CTDSPLO15194 276 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TNFSF12O43508 249 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CX3CL1P78423 397 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 NDPQ00604 133 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 VMA21Q3ZAQ7 101 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 KHDC1LQ5JSQ8 128 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 VAX1Q5SQQ9 334 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ZNF818PQ6ZRF7 136 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 OR4S2Q8NH73 311 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 OSR1Q8TAX0 266 aaPredicted RBP12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 SMIM4Q8WVI0 70 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 GPHA2Q96T91 129 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 MMP27Q9H306 513 aa12.8□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 A0A1W2PRX2 142 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 SRRM4A7MD48 611 aaKnown RBP12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CA2P00918 260 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CD3DP04234 171 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CRYGBP07316 175 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TBPP20226 339 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 GNRHRP30968 328 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TNFSF8P32971 234 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 KIR2DS2P43631 304 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CFHR3Q02985 330 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 SSBP1Q04837 148 aaKnown RBP12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CATR1Q13166 79 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 RNASE10Q5GAN6 216 aaKnown RBP12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TEX38Q6PEX7 206 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ZNF562Q6V9R5 426 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 PPP1R27Q86WC6 154 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TMEM229BQ8NBD8 167 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ABHD5Q8WTS1 349 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 NDUFA13Q9P0J0 144 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 A3GALT2U3KPV4 340 aa12.79□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 IFNA6P05013 189 aa12.78□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CRIP2P52943 208 aaPredicted RBP12.78□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TAS2R19P59542 299 aa12.78□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 UBE2KP61086 200 aa12.78□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TEX45Q8NA69 505 aa12.78□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 FAM110DQ8TAY7 271 aaPredicted RBP12.78□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 FBXO7Q9Y3I1 522 aa12.78□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 WSB1Q9Y6I7 421 aa12.78□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TRAV41A0A0B4J266 112 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 FABP12A6NFH5 140 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 G3V318 75 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 IGHG4P01861 327 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 S100A5P33763 92 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 BRWD1-AS2P59051 145 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 FOXE3Q13461 319 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ECSCRQ19T08 205 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 CXorf66Q5JRM2 361 aaPredicted RBP12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 AADACL3Q5VUY0 350 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 OR4F17Q8NGA8 305 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 OR51H1Q8NH63 302 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 DGCR14Q96DF8 476 aaKnown RBP12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 OR4F4Q96R69 305 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SOSTQ9BQB4 213 aa12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 TINAGL1Q9GZM7 467 aaPredicted RBP12.77□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 DPPA5A6NC42 116 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 GPR31O00270 319 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 GSTZ1O43708 216 aaPredicted RBP12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 CD74P04233 296 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 ELANEP08246 267 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 SAA1P0DJI8 122 aaPredicted RBP12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 PPIFP30405 207 aaKnown RBP12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 UCP3P55916 312 aa12.76□□□□□ -0.37
MSH5-SAPCD1-206ENST00000491552 RPL23AP62750 156 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms