RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 RPL39P5Q59GN2 51 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 TMEM88Q6PEY1 159 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 LRTM2Q8N967 370 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 LY6G5BQ8NDX9 201 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 C10orf105Q8TEF2 133 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 SEC22AQ96IW7 307 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 PIMREGQ9BSJ6 248 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 METTL8Q9H825 291 aaKnown RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 LOC105371242A0A075B767 164 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 SAA2-SAA4A0A096LPE2 208 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 C13orf42A0A1B0GVH6 325 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 KIAA1324LA8MWY0 1029 aaPredicted RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 SAA2P0DJI9 122 aaPredicted RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 PAX1P15863 534 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 RPA2P15927 270 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 ZFP36P26651 326 aaKnown RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 LINC00205P59089 165 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 LMO4P61968 165 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 RPL30P62888 115 aaKnown RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 HABP2Q14520 560 aaPredicted RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 OR2B11Q5JQS5 317 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 TMEM268Q5VZI3 342 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 CLEC2AQ6UVW9 174 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 C1orf229Q6ZS94 237 aaPredicted RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 SLC25A48Q6ZT89 311 aaKnown RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 LYZL2Q7Z4W2 148 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 ODF3L1Q8IXM7 274 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 LGI3Q8N145 548 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 RXFP4Q8TDU9 374 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 C2CD4CQ8TF44 421 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 C18orf12Q96KH6 178 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 LIN7CQ9NUP9 197 aaKnown RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 METTL1Q9UBP6 276 aaKnown RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 APCP25054 2843 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 MAP1AP78559 2803 aaPredicted RBP8.93□□□□□ -0.98
COL21A1-211ENST00000488912 A0A1W2PPH5 198 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 C5orf51A6NDU8 294 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 LIPFP07098 398 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 PAX6P26367 422 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 CBLN2Q8IUK8 224 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 LYG1Q8N1E2 194 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 SLC35G3Q8N808 338 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 RAB39BQ96DA2 213 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 OR10C1Q96KK4 312 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 TMEM56Q96MV1 263 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 ONECUT1Q9UBC0 465 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 TMEM56-RWDD3S4R434 201 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 IGHV4-30-2A0A087WSY4 118 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 FXYD6-FXYD2A0A087WZ82 144 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 A0A087X0M5 115 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 A0A1B0GX30 115 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 LINC00473A8K010 186 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 RNF212BA8MTL3 300 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 NDUFS8O00217 210 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 CDS2O95674 445 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 UBA52P62987 128 aaKnown RBP8.93□□□□□ -0.98
COL21A1-211ENST00000488912 SRPXP78539 464 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 PRB3Q04118 309 aaPredicted RBP8.93□□□□□ -0.98
COL21A1-211ENST00000488912 GGNBP1Q5YKI7 109 aa8.93□□□□□ -0.98
COL21A1-211ENST00000488912 VWC2LB2RUY7 222 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 M0R1X1 148 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 RAB29O14966 203 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 RAMP3O60896 148 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 SPDEFO95238 335 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 RBP4P02753 201 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 SERPINE2P07093 398 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 DUTP33316 252 aaKnown RBP8.92□□□□□ -0.98
COL21A1-211ENST00000488912 SPCS3P61009 180 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 LCN2P80188 198 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 SRSF4Q08170 494 aaKnown RBP8.92□□□□□ -0.98
COL21A1-211ENST00000488912 CATR1Q13166 79 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 ZNF585BQ52M93 769 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 ZNF66Q6ZN08 573 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 ZNF695Q8IW36 515 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 SELENOHQ8IZQ5 122 aaKnown RBP8.92□□□□□ -0.98
COL21A1-211ENST00000488912 TCTEX1D2Q8WW35 142 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 ASB13Q8WXK3 278 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 HSD17B10Q99714 261 aaKnown RBP8.92□□□□□ -0.98
COL21A1-211ENST00000488912 TMEM133Q9H2Q1 129 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 IGHV4-61A0A0C4DH41 118 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 BRWD1-AS2P59051 145 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 Q8N7P7 452 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 THAP6Q8TBB0 222 aa8.92□□□□□ -0.98
COL21A1-211ENST00000488912 FASNP49327 2511 aaKnown RBP8.91□□□□□ -0.98
COL21A1-211ENST00000488912 NAV2Q8IVL1 2488 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 J3QR06 171 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 IFNA21P01568 189 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 IGKV1-39P01597 117 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 IGKV1D-39P04432 117 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 TAS2R60P59551 318 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 ARF6P62330 175 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 DEFA6Q01524 100 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 LRRC37A5PQ49AS3 106 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 NCR3LG1Q68D85 454 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 FAM219AQ8IW50 185 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 ABHD12Q8N2K0 398 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.91□□□□□ -0.98
COL21A1-211ENST00000488912 PPP1R1CQ8WVI7 109 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 MFFQ9GZY8 342 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 GAB2Q9UQC2 676 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms