RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 CT45A3Q8NHU0 189 aa16.65■□□□□ 0.26
NECAB3-213ENST00000488489 RAB1BQ9H0U4 201 aa16.65■□□□□ 0.26
NECAB3-213ENST00000488489 LAMP3Q9UQV4 416 aa16.65■□□□□ 0.26
NECAB3-213ENST00000488489 RNF212BA8MTL3 300 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 GPR137BO60478 399 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 TSPAN15O95858 294 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 SNCAP37840 140 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 MEF2CQ06413 473 aaPredicted RBP16.64■□□□□ 0.25
NECAB3-213ENST00000488489 LRRC10Q5BKY1 277 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 CXorf66Q5JRM2 361 aaPredicted RBP16.64■□□□□ 0.25
NECAB3-213ENST00000488489 Q6ZRM9 215 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 C1orf229Q6ZS94 237 aaPredicted RBP16.64■□□□□ 0.25
NECAB3-213ENST00000488489 DTX2Q86UW9 622 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 SFT2D1Q8WV19 159 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 GPR146Q96CH1 333 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 IDI2-AS1Q9NZ38 188 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 MALRD1Q5VYJ5 2156 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 BORCS7-ASMTA0A0B4J1R7 106 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 C17orf98A8MV24 154 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 CLDN1O95832 211 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 CCL3L1P16619 93 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 GPR12P47775 334 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 PRAMEF5Q5TYX0 476 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 ZFP82Q8N141 532 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 GINS3Q9BRX5 216 aa16.64■□□□□ 0.25
NECAB3-213ENST00000488489 RCL1Q9Y2P8 373 aaKnown RBP16.64■□□□□ 0.25
NECAB3-213ENST00000488489 UTP20O75691 2785 aaKnown RBP16.64■□□□□ 0.25
NECAB3-213ENST00000488489 ST8SIA3O43173 380 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 PPT1P50897 306 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 RAB5BP61020 215 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 MIDNQ504T8 468 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 RPL39P5Q59GN2 51 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 GPR157Q5UAW9 335 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 TCTEX1D2Q8WW35 142 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 H1FXQ92522 213 aaKnown RBP16.63■□□□□ 0.25
NECAB3-213ENST00000488489 BSCL2Q96G97 398 aaPredicted RBP16.63■□□□□ 0.25
NECAB3-213ENST00000488489 SPIN2AQ99865 258 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 SPIN2BQ9BPZ2 258 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 RAB9BQ9NP90 201 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 IGHV2-70P01814 119 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 RNF224P0DH78 156 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 EPHA1P21709 976 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 P2RY1P47900 373 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 ZNF439Q8NDP4 499 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 ABHD14AQ9BUJ0 271 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 WFDC1Q9HC57 220 aa16.63■□□□□ 0.25
NECAB3-213ENST00000488489 NKX2-1P43699 371 aaPredicted RBP16.62■□□□□ 0.25
NECAB3-213ENST00000488489 MEOX2P50222 304 aa16.62■□□□□ 0.25
NECAB3-213ENST00000488489 HABP2Q14520 560 aaPredicted RBP16.62■□□□□ 0.25
NECAB3-213ENST00000488489 SCRT1Q9BWW7 348 aa16.62■□□□□ 0.25
NECAB3-213ENST00000488489 RPUSD1Q9UJJ7 312 aaKnown RBP16.62■□□□□ 0.25
NECAB3-213ENST00000488489 ITGB1BP1O14713 200 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 PITX3O75364 302 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 NXPH3O95157 252 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 DUTP33316 252 aaKnown RBP16.61■□□□□ 0.25
NECAB3-213ENST00000488489 POLR2GP62487 172 aaKnown RBP eCLIP16.61■□□□□ 0.25
NECAB3-213ENST00000488489 ZNF816Q0VGE8 651 aaPredicted RBP16.61■□□□□ 0.25
NECAB3-213ENST00000488489 CATR1Q13166 79 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 NCR3LG1Q68D85 454 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 CLEC9AQ6UXN8 241 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 ZNF66Q6ZN08 573 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 ETV3LQ6ZN32 361 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 FAM216AQ8WUB2 273 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 LSM10Q969L4 123 aaKnown RBP16.61■□□□□ 0.25
NECAB3-213ENST00000488489 CLCC1Q96S66 551 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 HSD17B10Q99714 261 aaKnown RBP16.61■□□□□ 0.25
NECAB3-213ENST00000488489 FSTL3O95633 263 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 ID3Q02535 119 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 GUK1Q16774 197 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 ODF3L1Q8IXM7 274 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 HIST1H2BAQ96A08 127 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 ZNF714Q96N38 554 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 MAGT1Q9H0U3 335 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 C11orf1Q9H5F2 150 aa16.61■□□□□ 0.25
NECAB3-213ENST00000488489 B2MP61769 119 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 S100A12P80511 92 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 ZNF616Q08AN1 781 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 RNF212Q495C1 297 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 ZNF841Q6ZN19 808 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 ZNF843Q8N446 348 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 GAL3ST2Q9H3Q3 398 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 UBTD1Q9HAC8 227 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 RPS10P5Q9NQ39 176 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 ZNRD1Q9P1U0 126 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 STRAPQ9Y3F4 350 aaKnown RBP16.6■□□□□ 0.25
NECAB3-213ENST00000488489 A0A1B0GU03 582 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 A6NNC1 897 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 S1PR2O95136 353 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 CAMLGP49069 296 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 GNG10P50151 68 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 RAB5CP51148 216 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 AKIRIN2Q53H80 203 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 AWAT1Q58HT5 328 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 RNASE11Q8TAA1 199 aaKnown RBP16.6■□□□□ 0.25
NECAB3-213ENST00000488489 CACNG5Q9UF02 275 aa16.6■□□□□ 0.25
NECAB3-213ENST00000488489 PIGBOS1A0A0B4J2F0 54 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 KIAA1324LA8MWY0 1029 aaPredicted RBP16.59■□□□□ 0.25
NECAB3-213ENST00000488489 C1orf196B1AJZ1 125 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 M0R1X1 148 aa16.59■□□□□ 0.25
NECAB3-213ENST00000488489 KRASP01116 189 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms