RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 DHCR7Q9UBM7 475 aaKnown RBP1.14□□□□□ -2.23
USP9X-208ENST00000487625 AK3Q9UIJ7 227 aa1.14□□□□□ -2.23
USP9X-208ENST00000487625 RWDD2AQ9UIY3 292 aa1.14□□□□□ -2.23
USP9X-208ENST00000487625 PRNDQ9UKY0 176 aa1.14□□□□□ -2.23
USP9X-208ENST00000487625 ANAPC10Q9UM13 185 aa1.14□□□□□ -2.23
USP9X-208ENST00000487625 MRPS16Q9Y3D3 137 aaKnown RBP1.14□□□□□ -2.23
USP9X-208ENST00000487625 HSPB11Q9Y547 144 aa1.14□□□□□ -2.23
USP9X-208ENST00000487625 CHD4Q14839 1912 aa1.14□□□□□ -2.23
USP9X-208ENST00000487625 KIF1BO60333 1816 aa1.14□□□□□ -2.23
USP9X-208ENST00000487625 MIA2Q96PC5 1412 aa1.14□□□□□ -2.23
USP9X-208ENST00000487625 PTPRJQ12913 1337 aa1.14□□□□□ -2.23
USP9X-208ENST00000487625 UBR2Q8IWV8 1755 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 MIA3Q5JRA6 1907 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 KIAA1671Q9BY89 1806 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ABCC12Q96J65 1359 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 TMED7-TICAM2A0A0A6YYA0 188 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 TRAV4A0A0B4J268 109 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 A0A1B0GX51 115 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 A0A1W2PRE2 83 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 CIB4A0PJX0 185 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 IZUMO1RA6ND01 250 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ZNF850A8MQ14 1090 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 NDUFC2-KCTD14E9PQ53 114 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 C19orf84I3L1E1 186 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 M0R381 172 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 LST1O00453 97 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 DEDDO75618 318 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 PIAS1O75925 651 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 KCNK2O95069 426 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 CDRT1O95170 752 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 PDYNP01213 254 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 IGLV3-25P01717 112 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 HLA-DRB1P01911 266 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 FBP1P09467 338 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 CD7P09564 240 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 FAM228BP0C875 321 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 PTHLHP12272 177 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 RPS4Y1P22090 263 aaKnown RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 CRABP2P29373 138 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 G6PCP35575 357 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 UBE2AP49459 152 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 NUDT2P50583 147 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ZNF83P51522 516 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ZNF140P52738 457 aaPredicted RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 RAB2AP61019 212 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 RPS28P62857 69 aaKnown RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 HERVK_113P63121 156 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 DYNLL1P63167 89 aaKnown RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 ELF3P78545 371 aaPredicted RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 EIF4EBP1Q13541 118 aaPredicted RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 CST6Q15828 149 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 BRMS1LQ5PSV4 323 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ZNF678Q5SXM1 525 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 NXNL2Q5VZ03 156 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 Q5W150 140 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 Q6ZS49 121 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 FA2HQ7L5A8 372 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 TCF24Q7RTU0 167 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 TCF23Q7RTU1 214 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 DAZ4Q86SG3 579 aaKnown RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 LRRC28Q86X40 367 aaPredicted RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 UMODL1-AS1Q8N2C9 162 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 SLC22A24Q8N4F4 322 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 RPRMLQ8N4K4 120 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ZDHHC22Q8N966 263 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ZNF439Q8NDP4 499 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 NUP35Q8NFH5 326 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 OR13C8Q8NGS7 320 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 OR13D1Q8NGV5 346 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 GNPDA2Q8TDQ7 276 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 TWIST2Q8WVJ9 160 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 SKA2Q8WVK7 121 aaPredicted RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 APOBEC3DQ96AK3 386 aaPredicted RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 ROPN1LQ96C74 230 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 GNPNAT1Q96EK6 184 aaPredicted RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 PDXPQ96GD0 296 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 SLC25A44Q96H78 314 aaPredicted RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 REEP6Q96HR9 211 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 PPP1R2P1Q96PQ5 205 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 PEBP4Q96S96 227 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 CCL13Q99616 98 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 AIF1LQ9BQI0 150 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ANAPC13Q9BS18 74 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ZNF436Q9C0F3 470 aaPredicted RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 TMEM222Q9H0R3 208 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 FAM60AQ9NP50 221 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 LHX9Q9NQ69 397 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 DAZ1Q9NQZ3 744 aaKnown RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 ACER3Q9NUN7 267 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 TMEM38BQ9NVV0 291 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ZNRD1Q9P1U0 126 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 ENOPH1Q9UHY7 261 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 JPT1Q9UK76 154 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 COQ4Q9Y3A0 265 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 FAM32AQ9Y421 112 aaKnown RBP1.13□□□□□ -2.23
USP9X-208ENST00000487625 TMEM14AQ9Y6G1 99 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 TRPM1Q7Z4N2 1603 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 TNS2Q63HR2 1409 aa1.13□□□□□ -2.23
USP9X-208ENST00000487625 FMN1Q68DA7 1419 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms