RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SFXN3Q9BWM7 321 aa14.93□□□□□ -0.02
PDLIM7-207ENST00000486828 CEBPZOSA8MTT3 80 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 ZNF727A8MUV8 499 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 SPRY3O43610 288 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 IFNA1P01562 189 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 IGKV1D-33P01593 117 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 IGKV1-33P01594 117 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 VWC2Q2TAL6 325 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 VHLLQ6RSH7 139 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 HEPN1Q6WQI6 88 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 RPP25LQ8N5L8 163 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 RBMXL3Q8N7X1 1067 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 ZNRF1Q8ND25 227 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 CA5BP1Q8WTZ4 195 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 ITLN1Q8WWA0 313 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 SIRT7Q9NRC8 400 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 VAX2Q9UIW0 290 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 USF3Q68DE3 2245 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 MGAQ8IWI9 3026 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 FAM90A9PA6NNJ1 464 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 HPRT1P00492 218 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 LOXL3P58215 753 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 AARDQ4LEZ3 155 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 ACSM6Q6P461 480 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 SLC39A9Q9NUM3 307 aa14.92□□□□□ -0.02
PDLIM7-207ENST00000486828 B4DEV8 164 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 UBE2CO00762 179 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 FCGR3BO75015 233 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 OR9G9P0C7N8 305 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 FGF7P21781 194 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 CEACAM8P31997 349 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 GATA4P43694 442 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 GNB2P62879 340 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 FAM180AQ6UWF9 173 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 C1QL4Q86Z23 238 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 LHX4Q969G2 390 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 PLPPR2Q96GM1 343 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 QTRT1Q9BXR0 403 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 NCOR1P1Q9H4R4 102 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 OR6C3Q9NZP0 311 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 CACNA1DQ01668 2161 aa14.91□□□□□ -0.02
PDLIM7-207ENST00000486828 A0A1W2PPE3 182 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 CXorf65A6NEN9 183 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 K7EM74 188 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 M0R1X1 148 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 ATXN7O15265 892 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 MBP02144 154 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 EDDM3BP56851 147 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 PNRC1Q12796 327 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 SPINK9Q5DT21 86 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 C12orf57Q99622 126 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 IFI27L2Q9H2X8 130 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 CALYQ9NYX4 217 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 RBFOX2O43251 390 aaKnown RBP eCLIP14.9□□□□□ -0.021e-6■■■■□ 23.2
PDLIM7-207ENST00000486828 LY86O95711 162 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 C1QTNF9P0C862 333 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 OR2B8PP59922 312 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 TFF3Q07654 80 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 FAM222BQ8WU58 562 aa14.9□□□□□ -0.02
PDLIM7-207ENST00000486828 DIDO1Q9BTC0 2240 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 CTXND1A0A1B0GTU2 59 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 C15orf62A8K5M9 175 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 IFNA17P01571 189 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 CGB3P0DN86 165 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 CGB7P0DN87 165 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 MDKP21741 143 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 ZNF134P52741 427 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 HNF4GQ14541 408 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 KRTCAP3Q53RY4 240 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 RBMS3Q6XE24 437 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 ZNF600Q6ZNG1 722 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 FAM57AQ8TBR7 257 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 NPCDR1Q9BY65 106 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
PDLIM7-207ENST00000486828 ITGB1BP1O14713 200 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 EIF3GO75821 320 aaKnown RBP eCLIP14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 RPS16P62249 146 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 ELOBQ15370 118 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 RPL39P5Q59GN2 51 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 FFAR4Q5NUL3 377 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 PRAMEF5Q5TYX0 476 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 SPACA3Q8IXA5 215 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 OR10G9Q8NGN4 311 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 OR10G7Q8NGN6 311 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 Q8TCH9 128 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 METTL1Q9UBP6 276 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 GAB2Q9UQC2 676 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 PTPRQQ9UMZ3 2332 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 ZZEF1O43149 2961 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 TPRP12270 2363 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 IGHV2-5P01817 119 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 KIR2DS2P43631 304 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 MEOX2P50222 304 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 SELENOVP59797 346 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 Q8WTZ3 238 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 SLC25A22Q9H936 323 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 RAB9BQ9NP90 201 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 RNF7Q9UBF6 113 aa14.88□□□□□ -0.03
PDLIM7-207ENST00000486828 A8MXE2 369 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 C17orf112F2Z3M2 114 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms