RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PEF1Q9UBV8 284 aaKnown RBP14.67□□□□□ -0.06
COL27A1-205ENST00000485397 ZNF230Q9UIE0 474 aaPredicted RBP14.67□□□□□ -0.06
COL27A1-205ENST00000485397 RAB22AQ9UL26 194 aa14.67□□□□□ -0.06
COL27A1-205ENST00000485397 RBMXL2O75526 392 aaKnown RBP14.66□□□□□ -0.06
COL27A1-205ENST00000485397 BRI3O95415 125 aa14.66□□□□□ -0.06
COL27A1-205ENST00000485397 GNB3P16520 340 aa14.66□□□□□ -0.06
COL27A1-205ENST00000485397 MAP2K4P45985 399 aa14.66□□□□□ -0.06
COL27A1-205ENST00000485397 ZNF343Q6P1L6 599 aa14.66□□□□□ -0.06
COL27A1-205ENST00000485397 A0A075B6Q4 140 aa14.65□□□□□ -0.06
COL27A1-205ENST00000485397 LCE6AA0A183 80 aa14.65□□□□□ -0.06
COL27A1-205ENST00000485397 MSGN1A6NI15 193 aa14.65□□□□□ -0.06
COL27A1-205ENST00000485397 H0Y980 276 aa14.65□□□□□ -0.06
COL27A1-205ENST00000485397 CSN3P07498 182 aa14.65□□□□□ -0.06
COL27A1-205ENST00000485397 AADACP22760 399 aa14.65□□□□□ -0.06
COL27A1-205ENST00000485397 NRG4Q8WWG1 115 aa14.65□□□□□ -0.06
COL27A1-205ENST00000485397 PHB2Q99623 299 aa14.65□□□□□ -0.06
COL27A1-205ENST00000485397 MGLLQ99685 303 aa14.65□□□□□ -0.06
COL27A1-205ENST00000485397 RBM7Q9Y580 266 aaKnown RBP14.65□□□□□ -0.06
COL27A1-205ENST00000485397 MFNGO00587 321 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 PSMD7P51665 324 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 OR10A3P58181 314 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 TAGLNQ01995 201 aaKnown RBP14.64□□□□□ -0.07
COL27A1-205ENST00000485397 CBX3Q13185 183 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 HAGHQ16775 308 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 RTL8BQ17RB0 113 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 IDO2Q6ZQW0 420 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 OR10R2Q8NGX6 335 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 ISOC1Q96CN7 298 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 USMG5Q96IX5 58 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 THAP7Q9BT49 309 aaPredicted RBP14.64□□□□□ -0.07
COL27A1-205ENST00000485397 DNAH1Q9P2D7 4330 aa14.64□□□□□ -0.07
COL27A1-205ENST00000485397 SHISA3A0PJX4 238 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 IZUMO1RA6ND01 250 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 RAB27BO00194 218 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 RRASP10301 218 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 DUTP33316 252 aaKnown RBP14.63□□□□□ -0.07
COL27A1-205ENST00000485397 TNXAQ16473 311 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 PRSS8Q16651 343 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 RPEL1Q2QD12 228 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 TEX45Q8NA69 505 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 ADAD2Q8NCV1 583 aaKnown RBP14.63□□□□□ -0.07
COL27A1-205ENST00000485397 DDB2Q92466 427 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 SPATA25Q9BR10 227 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 GINS4Q9BRT9 223 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 ACOT13Q9NPJ3 140 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 TNCP24821 2201 aa14.63□□□□□ -0.07
COL27A1-205ENST00000485397 IGKV1D-8A0A087WSZ0 117 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 A0A0B4J203 849 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 LINC00473A8K010 186 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 DIRAS3O95661 229 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 CRYZL1O95825 349 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 CRHBPP24387 322 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 RANBP1P43487 201 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 UBE2KP61086 200 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 TATDN3Q17R31 274 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 VMA21Q3ZAQ7 101 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 PRSS48Q7RTY5 328 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 SRSF12Q8WXF0 261 aaKnown RBP14.62□□□□□ -0.07
COL27A1-205ENST00000485397 STARD9Q9P2P6 4700 aa14.62□□□□□ -0.07
COL27A1-205ENST00000485397 J3QRK9 145 aa14.61□□□□□ -0.07
COL27A1-205ENST00000485397 PRH1P02810 166 aa14.61□□□□□ -0.07
COL27A1-205ENST00000485397 OR9G9P0C7N8 305 aa14.61□□□□□ -0.07
COL27A1-205ENST00000485397 HIST1H1DP16402 221 aaKnown RBP14.61□□□□□ -0.07
COL27A1-205ENST00000485397 GADD45AP24522 165 aa14.61□□□□□ -0.07
COL27A1-205ENST00000485397 SSX1Q16384 188 aa14.61□□□□□ -0.07
COL27A1-205ENST00000485397 H1FOOQ8IZA3 346 aaPredicted RBP14.61□□□□□ -0.07
COL27A1-205ENST00000485397 TUBA4BQ9H853 241 aa14.61□□□□□ -0.07
COL27A1-205ENST00000485397 AKIP1Q9NQ31 210 aa14.61□□□□□ -0.07
COL27A1-205ENST00000485397 SIGLEC8Q9NYZ4 499 aa14.61□□□□□ -0.07
COL27A1-205ENST00000485397 ELF5Q9UKW6 265 aaPredicted RBP14.61□□□□□ -0.07
COL27A1-205ENST00000485397 IFITM5A6NNB3 132 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 PDCD5O14737 125 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 MPPED1O15442 326 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 MECP2P51608 486 aaKnown RBP14.6□□□□□ -0.07
COL27A1-205ENST00000485397 RHOGP84095 191 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 ZNF45Q02386 682 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 ARFRP1Q13795 201 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 LCN12Q6JVE5 192 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 GTSCR1Q86UQ5 136 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 Q8N402 240 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 ACOT12Q8WYK0 555 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 SNAPC3Q92966 411 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 ADTRPQ96IZ2 230 aa14.6□□□□□ -0.07
COL27A1-205ENST00000485397 TRAV1-2A0A0B4J238 106 aa14.59□□□□□ -0.07
COL27A1-205ENST00000485397 BMPR1BO00238 502 aa14.59□□□□□ -0.07
COL27A1-205ENST00000485397 OR2A4O95047 310 aa14.59□□□□□ -0.07
COL27A1-205ENST00000485397 RAB6AP20340 208 aa14.59□□□□□ -0.07
COL27A1-205ENST00000485397 TALDO1P37837 337 aa14.59□□□□□ -0.07
COL27A1-205ENST00000485397 ADAMTSL5Q6ZMM2 481 aa14.59□□□□□ -0.07
COL27A1-205ENST00000485397 ZNF430Q9H8G1 570 aaPredicted RBP14.59□□□□□ -0.07
COL27A1-205ENST00000485397 SAA1P0DJI8 122 aaPredicted RBP14.58□□□□□ -0.08
COL27A1-205ENST00000485397 ATP5G2Q06055 141 aa14.58□□□□□ -0.08
COL27A1-205ENST00000485397 EXOSC2Q13868 293 aaKnown RBP14.58□□□□□ -0.08
COL27A1-205ENST00000485397 C10orf55Q5SWW7 151 aa14.58□□□□□ -0.08
COL27A1-205ENST00000485397 Q6ZS49 121 aa14.58□□□□□ -0.08
COL27A1-205ENST00000485397 OSR1Q8TAX0 266 aaPredicted RBP14.58□□□□□ -0.08
COL27A1-205ENST00000485397 RETNQ9HD89 108 aa14.58□□□□□ -0.08
COL27A1-205ENST00000485397 PEMTQ9UBM1 199 aa14.58□□□□□ -0.08
COL27A1-205ENST00000485397 EPPK1P58107 5090 aaKnown RBP14.57□□□□□ -0.08
COL27A1-205ENST00000485397 TRBV9A0A0B4J1U6 114 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms