RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 C6orf201Q7Z4U5 140 aa11.03□□□□□ -0.64
HDAC6-224ENST00000481929 CDH26Q8IXH8 852 aa11.03□□□□□ -0.64
HDAC6-224ENST00000481929 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
HDAC6-224ENST00000481929 C11orf68Q9H3H3 251 aaKnown RBP11.03□□□□□ -0.64
HDAC6-224ENST00000481929 OAZ3Q9UMX2 235 aa11.03□□□□□ -0.64
HDAC6-224ENST00000481929 TRBV5-5A0A0J9YX44 114 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 GYS2P54840 703 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 GNGT1P63211 74 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 HLA-DRB3P79483 266 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 PRSS8Q16651 343 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 MRGPRG-AS1Q2M3A8 158 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 VMA21Q3ZAQ7 101 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 Q499Y3 187 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 DNAL1Q4LDG9 190 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 TMEM177Q53S58 311 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-224ENST00000481929 MARC2Q969Z3 335 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 SMIM19Q96E16 107 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 SPIN2AQ99865 258 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 SPAG8Q99932 426 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-224ENST00000481929 RARRES2Q99969 163 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 SPIN2BQ9BPZ2 258 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 AMBNQ9NP70 447 aa11.02□□□□□ -0.65
HDAC6-224ENST00000481929 SRRM4A7MD48 611 aaKnown RBP11.01□□□□□ -0.65
HDAC6-224ENST00000481929 GYG2O15488 501 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 FCGR1AP12314 374 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 RTL8BQ17RB0 113 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 CLEC19AQ6UXS0 136 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 SLC25A42Q86VD7 318 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 TTC9CQ8N5M4 171 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 TEX45Q8NA69 505 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 OR52I1Q8NGK6 324 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 GALNT14Q96FL9 552 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 MAP6D1Q9H9H5 199 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 GHRLQ9UBU3 117 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 ORC6Q9Y5N6 252 aa11.01□□□□□ -0.65
HDAC6-224ENST00000481929 ACTL6BO94805 426 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 IGHV3-23P01764 117 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 LIMS3P0CW19 117 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 LIMS4P0CW20 117 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 MFAP2P55001 183 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 UBE2KP61086 200 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 TAGLNQ01995 201 aaKnown RBP11□□□□□ -0.65
HDAC6-224ENST00000481929 IDO2Q6ZQW0 420 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 CCDC140Q96MF4 163 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 RIMS4Q9H426 269 aaPredicted RBP11□□□□□ -0.65
HDAC6-224ENST00000481929 MGAT4AQ9UM21 535 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 AP4S1Q9Y587 144 aa11□□□□□ -0.65
HDAC6-224ENST00000481929 A0A1W2PPK0 400 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 SAC3D1A6NKF1 404 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 C11orf94C9JXX5 98 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 DYNC1I1O14576 645 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 RTL8CO15255 209 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 CREBL2O60519 120 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-224ENST00000481929 C8orf88P0DMB2 117 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 ODF3L2Q3SX64 289 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 ZNF585BQ52M93 769 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 TMPRSS11AQ6ZMR5 421 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 Q96MT0 163 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 C6orf62Q9GZU0 229 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-224ENST00000481929 RDH8Q9NYR8 311 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 MRPL27Q9P0M9 148 aaKnown RBP10.99□□□□□ -0.65
HDAC6-224ENST00000481929 ZNF257Q9Y2Q1 563 aa10.99□□□□□ -0.65
HDAC6-224ENST00000481929 TRBV5-7A0A0A0MS05 114 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 TRBV6-6A0A0A6YYG2 114 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 OGG1O15527 345 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 SCTP09683 121 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 RRASP10301 218 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 GABRB1P18505 474 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 YIF1BQ5BJH7 314 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 OR2G6Q5TZ20 316 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 NKAIN3Q8N8D7 197 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 EEF1AKMT3Q96AZ1 226 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 CENPNQ96H22 339 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-224ENST00000481929 UQCC2Q9BRT2 126 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 TMEM59Q9BXS4 323 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 C5orf66Q9H5L9 145 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 ZNF430Q9H8G1 570 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-224ENST00000481929 S4R3C0 116 aa10.98□□□□□ -0.65
HDAC6-224ENST00000481929 MPTX1A8MV57 137 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 TSPAN4O14817 238 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 S1PR2O95136 353 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 GSTT2P0CG29 244 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 GSTT2BP0CG30 244 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 UBBP0CG47 229 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 GALP22466 123 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 HTR2CP28335 458 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 RPS11P62280 158 aaKnown RBP eCLIP10.97□□□□□ -0.65
HDAC6-224ENST00000481929 RPS27AP62979 156 aaKnown RBP10.97□□□□□ -0.65
HDAC6-224ENST00000481929 ZIK1Q3SY52 487 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-224ENST00000481929 C10orf55Q5SWW7 151 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 OR10K2Q6IF99 312 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 UNQ9165/PRO28630Q6UXU0 137 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 ZNF575Q86XF7 245 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 OR11H2Q8NH07 326 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 OR5B3Q8NH48 314 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 SLC29A1Q99808 456 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 HDHD3Q9BSH5 251 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-224ENST00000481929 CSTL1Q9H114 145 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms