RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 LIMS4P0CW20 117 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 PTNP21246 168 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 CALRP27797 417 aaKnown RBP-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 ALDH3A1P30838 453 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 RPL28P46779 137 aaKnown RBP-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 VSNL1P62760 191 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 XRCC4Q13426 336 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 RAB31Q13636 194 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 C1DQ13901 141 aaKnown RBP-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 VAMP3Q15836 100 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 HSP90AA4PQ58FG1 418 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 MRPL52Q86TS9 123 aaKnown RBP-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 LRRC34Q8IZ02 419 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 OR2D3Q8NGH3 330 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 MITD1Q8WV92 249 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 SLC7A6Q92536 515 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 TMEM56Q96MV1 263 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 NMNAT3Q96T66 252 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 HBEGFQ99075 208 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 RAB1BQ9H0U4 201 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 NCOR1P1Q9H4R4 102 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 MRM2Q9UI43 246 aaKnown RBP-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 POFUT2Q9Y2G5 429 aa-0.18□□□□□ -2.44
R3HDM1-214ENST00000480793 COL7A1Q02388 2944 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 BDP1A6H8Y1 2624 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 H3BT86 120 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 TXNDC9O14530 226 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 CRXO43186 299 aaPredicted RBP-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 GSTZ1O43708 216 aaPredicted RBP-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 KLRC4O43908 158 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 ORC5O43913 435 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 CST4P01036 141 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 CSTAP01040 98 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 TFPTP0C1Z6 253 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 ADORA1P30542 326 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 CA5AP35218 305 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 RCVRNP35243 200 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 CA7P43166 264 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 GABRA2P47869 451 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 TAS2R20P59543 309 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 TPI1P60174 286 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 RUNX1Q01196 453 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 ELOBQ15370 118 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 MIAQ16674 131 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 ACSM3Q53FZ2 586 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 LCN8Q6JVE9 175 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 SPATA8Q6RVD6 105 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 SSX6Q7RTT6 188 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 ATP5L2Q7Z4Y8 100 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 GPHB5Q86YW7 130 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 ZNF565Q8N9K5 539 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 UBQLN4Q9NRR5 601 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 SNX10Q9Y5X0 201 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 MAST2Q6P0Q8 1798 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 KIAA0232Q92628 1395 aa-0.19□□□□□ -2.44
R3HDM1-214ENST00000480793 IGSF10Q6WRI0 2623 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 PPBPP02775 128 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 PTMSP20962 102 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 LCN1P31025 176 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 EVX1P49640 407 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 SNAP25P60880 206 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 RAB14P61106 215 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 SRSF6Q13247 344 aaKnown RBP-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 ZNF705AQ6ZN79 300 aaPredicted RBP-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 UMODL1-AS1Q8N2C9 162 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 RORBQ92753 470 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 CPNE2Q96FN4 548 aaPredicted RBP-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 BZW2Q9Y6E2 419 aaKnown RBP-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 FLT4P35916 1363 aa-0.2□□□□□ -2.44
R3HDM1-214ENST00000480793 IGF2RP11717 2491 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 NUP153P49790 1475 aaKnown RBP-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 PTPRZ1P23471 2315 aaPredicted RBP-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 HRNRQ86YZ3 2850 aaPredicted RBP-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 LOC110117498A0A087WWA1 95 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 A0A0J9YW62 118 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 MEIS3P1A6NDR6 274 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 OR6C6A6NF89 314 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 C9JCJ5 164 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 MPZL2O60487 215 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 SCN2BO60939 215 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 ADAP1O75689 374 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 ARL6IP5O75915 188 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 ATP5G1P05496 136 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 SLC35E2BP0CK96 405 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 CCL2P13500 99 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 CRATP43155 626 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 STK38Q15208 465 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 PLPPR5Q32ZL2 321 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 SAPCD1Q5SSQ6 148 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 FAM27BQ5VT28 67 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 TEX36Q5VZQ5 186 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 TTC33Q6PID6 262 aaPredicted RBP-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 BAP18Q8IXM2 172 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 TET1Q8NFU7 2136 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 PPWD1Q96BP3 646 aaKnown RBP-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 OR7D2Q96RA2 312 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 UGT2B28Q9BY64 529 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 TMEM222Q9H0R3 208 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 RALGAPA2Q2PPJ7 1873 aa-0.21□□□□□ -2.44
R3HDM1-214ENST00000480793 CITO14578 2027 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms