RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 BLOC1S6Q9UL45 172 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 SMAD5-AS1Q9Y6J3 95 aa13.35□□□□□ -0.27
ECHDC1-216ENST00000479525 PRH1P02810 166 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 FCER2P06734 321 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 CLEC2LP0C7M8 214 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 NFYAP23511 347 aaPredicted RBP13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 HSPA13P48723 471 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 PSMD7P51665 324 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 CDNFQ49AH0 187 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 GPHA2Q96T91 129 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 PHB2Q99623 299 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 TXNL4BQ9NX01 149 aaKnown RBP13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 COA4Q9NYJ1 87 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 RAB26Q9ULW5 256 aa13.34□□□□□ -0.27
ECHDC1-216ENST00000479525 TENM3Q9P273 2699 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 C13orf42A0A1B0GVH6 325 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 TMEM235A6NFC5 223 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 ATP6V1G2O95670 118 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 RAB6AP20340 208 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 SERPINB10P48595 397 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 INSL3P51460 131 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 MXD1Q05195 221 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 TNXAQ16473 311 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 C10orf55Q5SWW7 151 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 PYHIN1Q6K0P9 492 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 H1FOOQ8IZA3 346 aaPredicted RBP13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 SPARTQ8N0X7 666 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 OR51E2Q9H255 320 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 DAPK2Q9UIK4 370 aa13.33□□□□□ -0.27
ECHDC1-216ENST00000479525 FRMD6-AS1P0C7T7 363 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 NHLRC4P0CG21 123 aaPredicted RBP13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 PTHLHP12272 177 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 CD40LGP29965 261 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 DUTP33316 252 aaKnown RBP13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 TMEM177Q53S58 311 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 C19orf35Q6ZS72 473 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 LGALS14Q8TCE9 139 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 ACOT12Q8WYK0 555 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 DDB2Q92466 427 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 OR4C12Q96R67 309 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 SLA2Q9H6Q3 261 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 DNAH7Q8WXX0 4024 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 IGKV1D-13A0A0B4J2D9 117 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 METTL21EPA6NDL7 271 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 MSGN1A6NI15 193 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 IGKV1-13P0DP09 117 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 GABARAPL2P60520 117 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 RPL30P62888 115 aaKnown RBP13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 RTL8BQ17RB0 113 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 UBE2UQ5VVX9 321 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 VKORC1L1Q8N0U8 176 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 OR6Q1Q8NGQ2 317 aa13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 RRP15Q9Y3B9 282 aaKnown RBP13.32□□□□□ -0.28
ECHDC1-216ENST00000479525 FCGR3BO75015 233 aa13.31□□□□□ -0.28
ECHDC1-216ENST00000479525 TUSC2O75896 110 aa13.31□□□□□ -0.28
ECHDC1-216ENST00000479525 SYNJ2BPP57105 145 aa13.31□□□□□ -0.28
ECHDC1-216ENST00000479525 CBX3Q13185 183 aa13.31□□□□□ -0.28
ECHDC1-216ENST00000479525 OR5H6Q8NGV6 325 aa13.31□□□□□ -0.28
ECHDC1-216ENST00000479525 DCUN1D5Q9BTE7 237 aa13.31□□□□□ -0.28
ECHDC1-216ENST00000479525 SELENOKQ9Y6D0 94 aa13.31□□□□□ -0.28
ECHDC1-216ENST00000479525 NOTOA8MTQ0 251 aa13.3□□□□□ -0.28
ECHDC1-216ENST00000479525 SSX5O60225 188 aa13.3□□□□□ -0.28
ECHDC1-216ENST00000479525 SAA1P0DJI8 122 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-216ENST00000479525 LGALS7P47929 136 aa13.3□□□□□ -0.28
ECHDC1-216ENST00000479525 DYRK1AQ13627 763 aa13.3□□□□□ -0.28
ECHDC1-216ENST00000479525 SRSF12Q8WXF0 261 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-216ENST00000479525 RCHY1Q96PM5 261 aa13.3□□□□□ -0.28
ECHDC1-216ENST00000479525 GAR1Q9NY12 217 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-216ENST00000479525 STUB1Q9UNE7 303 aa13.3□□□□□ -0.28
ECHDC1-216ENST00000479525 HMX3A6NHT5 357 aa13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 MPPED1O15442 326 aa13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 SDC2P34741 201 aa13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 PRSS8Q16651 343 aa13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 VMA21Q3ZAQ7 101 aa13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 SFXN4Q6P4A7 337 aa13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 TINAGL1Q9GZM7 467 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 ZNF430Q9H8G1 570 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 RANGRFQ9HD47 186 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 SPATA2Q9UM82 520 aa13.29□□□□□ -0.28
ECHDC1-216ENST00000479525 LOC100506127A0A0U1RQW1 187 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 MYOD1P15172 320 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 EDN2P20800 178 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 TGFBR1P36897 503 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 GNG2P59768 71 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 UBE2KP61086 200 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 HACD4Q5VWC8 232 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 KCTD9Q7L273 389 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 ANKRD13BQ86YJ7 626 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 GVQW1Q8N7I0 195 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 ELOVL1Q9BW60 279 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 S4R3C0 116 aa13.28□□□□□ -0.28
ECHDC1-216ENST00000479525 IZUMO1RA6ND01 250 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 MEIS3P1A6NDR6 274 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 TNFSF12O43508 249 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 IGLV1-51P01701 117 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 IGLV2-14P01704 120 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 DTYMKP23919 212 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 ZNF45Q02386 682 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 IL34Q6ZMJ4 242 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms