RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 KCTD9Q7L273 389 aa21.22■□□□□ 0.99
CCM2-211ENST00000478582 LHFPL1Q86WI0 220 aa21.22■□□□□ 0.99
CCM2-211ENST00000478582 Q8N402 240 aa21.22■□□□□ 0.99
CCM2-211ENST00000478582 OR4D10Q8NGI6 311 aa21.22■□□□□ 0.99
CCM2-211ENST00000478582 TSNAXQ99598 290 aaKnown RBP21.22■□□□□ 0.99
CCM2-211ENST00000478582 IGHG2P01859 326 aa21.21■□□□□ 0.99
CCM2-211ENST00000478582 ZNF735P0CB33 412 aa21.21■□□□□ 0.99
CCM2-211ENST00000478582 AKAIN1P0CW23 69 aa21.21■□□□□ 0.99
CCM2-211ENST00000478582 VDAC2P45880 294 aaPredicted RBP21.21■□□□□ 0.99
CCM2-211ENST00000478582 LGALS7P47929 136 aa21.21■□□□□ 0.99
CCM2-211ENST00000478582 RPS16P62249 146 aaKnown RBP21.21■□□□□ 0.99
CCM2-211ENST00000478582 C5orf64Q2M2E5 130 aa21.21■□□□□ 0.99
CCM2-211ENST00000478582 WNT10AQ9GZT5 417 aa21.21■□□□□ 0.99
CCM2-211ENST00000478582 KIAA1456Q9P272 454 aa21.21■□□□□ 0.99
CCM2-211ENST00000478582 RRHO14718 337 aa21.2■□□□□ 0.98
CCM2-211ENST00000478582 SPDEFO95238 335 aa21.2■□□□□ 0.98
CCM2-211ENST00000478582 ARSJQ5FYB0 599 aaPredicted RBP21.2■□□□□ 0.98
CCM2-211ENST00000478582 C9orf152Q5JTZ5 239 aa21.2■□□□□ 0.98
CCM2-211ENST00000478582 TRIM63Q969Q1 353 aa21.2■□□□□ 0.98
CCM2-211ENST00000478582 SRRQ9GZT4 340 aa21.2■□□□□ 0.98
CCM2-211ENST00000478582 PSG5Q15238 335 aa21.19■□□□□ 0.98
CCM2-211ENST00000478582 TCTEX1D2Q8WW35 142 aa21.19■□□□□ 0.98
CCM2-211ENST00000478582 RSRP1Q9BUV0 290 aa21.19■□□□□ 0.98
CCM2-211ENST00000478582 GPR31O00270 319 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 TNFSF12O43508 249 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 FCGR3BO75015 233 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 HLA-DRB1P01911 266 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 KIR2DS2P43631 304 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 BRWD1-AS2P59051 145 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 CMTM1Q8IZ96 169 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 SLC38A6Q8IZM9 456 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 GDPD1Q8N9F7 314 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 OR4C16Q8NGL9 310 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 TERB2Q8NHR7 220 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 OSR1Q8TAX0 266 aaPredicted RBP21.18■□□□□ 0.98
CCM2-211ENST00000478582 GPHA2Q96T91 129 aa21.18■□□□□ 0.98
CCM2-211ENST00000478582 DISC1C4P0D8 188 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 IGLV2-23P01705 113 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 ZNF45Q02386 682 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 CATR1Q13166 79 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 TMEM95Q3KNT9 176 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 LIN54Q6MZP7 749 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 SLC35E3Q7Z769 313 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 KLHDC1Q8N7A1 406 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 WIPF2Q8TF74 440 aaPredicted RBP21.17■□□□□ 0.98
CCM2-211ENST00000478582 HARBI1Q96MB7 349 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 FBXL15Q9H469 300 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 PTTG2Q9NZH5 202 aa21.17■□□□□ 0.98
CCM2-211ENST00000478582 SHOXO15266 292 aa21.16■□□□□ 0.98
CCM2-211ENST00000478582 RBFOX2O43251 390 aaKnown RBP eCLIP21.16■□□□□ 0.986e-11■■■■■ 38.6
CCM2-211ENST00000478582 KCNAB3O43448 404 aa21.16■□□□□ 0.98
CCM2-211ENST00000478582 PEX14O75381 377 aa21.16■□□□□ 0.98
CCM2-211ENST00000478582 PGLYRP1O75594 196 aaPredicted RBP21.16■□□□□ 0.98
CCM2-211ENST00000478582 CRYZL1O95825 349 aa21.16■□□□□ 0.98
CCM2-211ENST00000478582 KLF9Q13886 244 aaPredicted RBP21.16■□□□□ 0.98
CCM2-211ENST00000478582 TREML4Q6UXN2 200 aa21.16■□□□□ 0.98
CCM2-211ENST00000478582 OR4S2Q8NH73 311 aa21.16■□□□□ 0.98
CCM2-211ENST00000478582 DEDD2Q8WXF8 326 aa21.16■□□□□ 0.98
CCM2-211ENST00000478582 SRRM4A7MD48 611 aaKnown RBP21.15■□□□□ 0.98
CCM2-211ENST00000478582 CRYGBP07316 175 aa21.15■□□□□ 0.98
CCM2-211ENST00000478582 AP3S2P59780 193 aa21.15■□□□□ 0.98
CCM2-211ENST00000478582 FAAP20Q6NZ36 180 aa21.15■□□□□ 0.98
CCM2-211ENST00000478582 ZNF486Q96H40 463 aaPredicted RBP21.15■□□□□ 0.98
CCM2-211ENST00000478582 HSPB9Q9BQS6 159 aa21.15■□□□□ 0.98
CCM2-211ENST00000478582 METTL1Q9UBP6 276 aaKnown RBP21.15■□□□□ 0.98
CCM2-211ENST00000478582 MGAM2Q2M2H8 2515 aa21.14■□□□□ 0.98
CCM2-211ENST00000478582 LINC01548A6NM66 108 aa21.14■□□□□ 0.97
CCM2-211ENST00000478582 VSIG10L2P0DP72 767 aa21.14■□□□□ 0.97
CCM2-211ENST00000478582 FOXRED2Q8IWF2 684 aa21.14■□□□□ 0.97
CCM2-211ENST00000478582 TOMM5Q8N4H5 51 aa21.14■□□□□ 0.97
CCM2-211ENST00000478582 SDHCQ99643 169 aaPredicted RBP21.14■□□□□ 0.97
CCM2-211ENST00000478582 PRRT1Q99946 306 aa21.14■□□□□ 0.97
CCM2-211ENST00000478582 SLC2A8Q9NY64 477 aa21.14■□□□□ 0.97
CCM2-211ENST00000478582 ZNF580Q9UK33 172 aa21.14■□□□□ 0.97
CCM2-211ENST00000478582 TRRAPQ9Y4A5 3859 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 S100GP29377 79 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 ECI1P42126 302 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 PLGLAQ15195 96 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 SCGB2B2Q4G0G5 96 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 OR2B11Q5JQS5 317 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 SPAG16Q8N0X2 631 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 TCTEX1D1Q8N7M0 179 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 CD300LFQ8TDQ1 290 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 MRGPRFQ96AM1 343 aa21.13■□□□□ 0.97
CCM2-211ENST00000478582 IGHV7-81A0A0B4J1V7 117 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 M0QZ24 198 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 AP4M1O00189 453 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 SLC25A17O43808 307 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 UBE2KP61086 200 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 RND3P61587 244 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 TEX45Q8NA69 505 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 OR51H1Q8NH63 302 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 ZFAND1Q8TCF1 268 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 AKIP1Q9NQ31 210 aa21.12■□□□□ 0.97
CCM2-211ENST00000478582 PKD1L1Q8TDX9 2849 aa21.11■□□□□ 0.97
CCM2-211ENST00000478582 FCN1O00602 326 aa21.11■□□□□ 0.97
CCM2-211ENST00000478582 RLN1P04808 185 aa21.11■□□□□ 0.97
CCM2-211ENST00000478582 IGF1P05019 195 aa21.11■□□□□ 0.97
CCM2-211ENST00000478582 PGAM2P15259 253 aa21.11■□□□□ 0.97
CCM2-211ENST00000478582 FAUP35544 74 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms