RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 SLC6A1P30531 599 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 FCGR2CP31995 323 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 MYCNOSP40205 109 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 CDX1P47902 265 aaPredicted RBP17.74■□□□□ 0.43
TRAF4-211ENST00000478021 LGALS7P47929 136 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 CRIP2P52943 208 aaPredicted RBP17.74■□□□□ 0.43
TRAF4-211ENST00000478021 GNB1P62873 340 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 PJVKQ0ZLH3 352 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 ZNF562Q6V9R5 426 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 KCTD9Q7L273 389 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 MINDY2Q8NBR6 621 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 GRPEL2Q8TAA5 225 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 NUBP2Q9Y5Y2 271 aa17.74■□□□□ 0.43
TRAF4-211ENST00000478021 ARPC1BO15143 372 aaKnown RBP17.73■□□□□ 0.43
TRAF4-211ENST00000478021 SOX15O60248 233 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 ALDH3B2P48448 385 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 RORCP51449 518 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 RAB25P57735 213 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 RPL30P62888 115 aaKnown RBP17.73■□□□□ 0.43
TRAF4-211ENST00000478021 FXYD3Q14802 87 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 UNQ5815/PRO19632Q6UWF5 114 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 GPR141Q7Z602 305 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 LFNGQ8NES3 379 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 SECTM1Q8WVN6 248 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 ARPC1AQ92747 370 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 P2RX4Q99571 388 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 GNB4Q9HAV0 340 aa17.73■□□□□ 0.43
TRAF4-211ENST00000478021 CCL24O00175 119 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 HPGDSO60760 199 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 FCGR3BO75015 233 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 SLC22A5O76082 557 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 CRYGBP07316 175 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 CDK10Q15131 360 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 ZNF491Q8N8L2 437 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 OR5AP2Q8NGF4 316 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 MYOZ3Q8TDC0 251 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 C4orf3Q8WVX3 66 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 RCC1LQ96I51 464 aaKnown RBP17.72■□□□□ 0.43
TRAF4-211ENST00000478021 OR5B12Q96R08 314 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 GPHA2Q96T91 129 aa17.72■□□□□ 0.43
TRAF4-211ENST00000478021 FOXA2Q9Y261 457 aaPredicted RBP17.72■□□□□ 0.43
TRAF4-211ENST00000478021 MRPS7Q9Y2R9 242 aaKnown RBP17.72■□□□□ 0.43
TRAF4-211ENST00000478021 PPYP01298 95 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 ELK1P19419 428 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 RAB9AP51151 201 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 FXYD4P59646 89 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 SSBP2P81877 361 aaPredicted RBP17.71■□□□□ 0.43
TRAF4-211ENST00000478021 TMEM267Q0VDI3 215 aaPredicted RBP17.71■□□□□ 0.43
TRAF4-211ENST00000478021 KIAA0141Q14154 515 aaPredicted RBP17.71■□□□□ 0.43
TRAF4-211ENST00000478021 FOXB2Q5VYV0 432 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 IDO2Q6ZQW0 420 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 TCTEX1D2Q8WW35 142 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 ACOT12Q8WYK0 555 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 DCUN1D5Q9BTE7 237 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 CCL28Q9NRJ3 127 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 TAS2R8Q9NYW2 309 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 PRELID3BQ9Y3B1 194 aa17.71■□□□□ 0.43
TRAF4-211ENST00000478021 TNFSF12O43508 249 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 CNIH1O95406 144 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 APOA1P02647 267 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 PRSS3P35030 304 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 EIF4EBP1Q13541 118 aaPredicted RBP17.7■□□□□ 0.42
TRAF4-211ENST00000478021 VMA21Q3ZAQ7 101 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 ACTBL2Q562R1 376 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 SNX29P2Q8IUI4 249 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 TCTEX1D1Q8N7M0 179 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 EHFQ9NZC4 300 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 ANAPC10Q9UM13 185 aa17.7■□□□□ 0.42
TRAF4-211ENST00000478021 OSR1Q8TAX0 266 aaPredicted RBP17.69■□□□□ 0.42
TRAF4-211ENST00000478021 UBE2E2Q96LR5 201 aa17.69■□□□□ 0.42
TRAF4-211ENST00000478021 CMTM3Q96MX0 182 aa17.69■□□□□ 0.42
TRAF4-211ENST00000478021 HSD17B10Q99714 261 aaKnown RBP17.69■□□□□ 0.42
TRAF4-211ENST00000478021 SLC5A7Q9GZV3 580 aa17.69■□□□□ 0.42
TRAF4-211ENST00000478021 VSIG4Q9Y279 399 aa17.69■□□□□ 0.42
TRAF4-211ENST00000478021 SMIM31A0A1B0GVY4 71 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 FAM25AB3EWG3 89 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 FAM25CB3EWG5 89 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 FAM25GB3EWG6 89 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 PMP2P02689 132 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 RFX2P48378 723 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 UBE2KP61086 200 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 MRGPRG-AS1Q2M3A8 158 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 AKIRIN2Q53H80 203 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 MZT2AQ6P582 158 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 OVCH2Q7RTZ1 564 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 TMEM17Q86X19 198 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 MFSD4AQ8N468 514 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 MS4A10Q96PG2 267 aa17.68■□□□□ 0.42
TRAF4-211ENST00000478021 SAA1P0DJI8 122 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-211ENST00000478021 ZNF182P17025 639 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-211ENST00000478021 TNXAQ16473 311 aa17.67■□□□□ 0.42
TRAF4-211ENST00000478021 CLVS1Q8IUQ0 354 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-211ENST00000478021 TEX45Q8NA69 505 aa17.67■□□□□ 0.42
TRAF4-211ENST00000478021 OR11H1Q8NG94 326 aa17.67■□□□□ 0.42
TRAF4-211ENST00000478021 OR5M8Q8NGP6 311 aa17.67■□□□□ 0.42
TRAF4-211ENST00000478021 OR5H2Q8NGV7 314 aa17.67■□□□□ 0.42
TRAF4-211ENST00000478021 GIMAP1Q8WWP7 306 aa17.67■□□□□ 0.42
TRAF4-211ENST00000478021 AP3S1Q92572 193 aa17.67■□□□□ 0.42
TRAF4-211ENST00000478021 ALX4Q9H161 411 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-211ENST00000478021 I3L521 148 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms