RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 RTL8BQ17RB0 113 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 TMEM95Q3KNT9 176 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 RNASE10Q5GAN6 216 aaKnown RBP13.37□□□□□ -0.27
SCAF11-206ENST00000474828 STEAP1BQ6NZ63 245 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 KLHDC1Q8N7A1 406 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 RASL11BQ9BPW5 248 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 RSRP1Q9BUV0 290 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 BATF3Q9NR55 127 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 NBEAL1Q6ZS30 2694 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 SRRM4A7MD48 611 aaKnown RBP13.36□□□□□ -0.27
SCAF11-206ENST00000474828 J3QRK9 145 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 M0QYG6 137 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 MRGPRG-AS1Q2M3A8 158 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 LPCAT3Q6P1A2 487 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 KCTD9Q7L273 389 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 SLC35E3Q7Z769 313 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 OR4D10Q8NGI6 311 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 DEDD2Q8WXF8 326 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 HSPB9Q9BQS6 159 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 FAM212BQ9NTI7 297 aaPredicted RBP13.36□□□□□ -0.27
SCAF11-206ENST00000474828 PRELID3BQ9Y3B1 194 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 TRRAPQ9Y4A5 3859 aa13.36□□□□□ -0.27
SCAF11-206ENST00000474828 IGHV7-81A0A0B4J1V7 117 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 LINC01548A6NM66 108 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 KIR2DS2P43631 304 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 FXYD4P59646 89 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 TSPAN5P62079 268 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 CFHR3Q02985 330 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 MEF2DQ14814 521 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 RNASE12Q5GAN4 147 aaKnown RBP13.35□□□□□ -0.27
SCAF11-206ENST00000474828 LIN54Q6MZP7 749 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 TMEM17Q86X19 198 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 CADM3Q8N126 398 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 MRGPRFQ96AM1 343 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 THAP7Q9BT49 309 aaPredicted RBP13.35□□□□□ -0.27
SCAF11-206ENST00000474828 SLC2A8Q9NY64 477 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 KIAA1456Q9P272 454 aa13.35□□□□□ -0.27
SCAF11-206ENST00000474828 AP4M1O00189 453 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 PGLYRP1O75594 196 aaPredicted RBP13.34□□□□□ -0.27
SCAF11-206ENST00000474828 RAB3DO95716 219 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 UBE2KP61086 200 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 RPS16P62249 146 aaKnown RBP13.34□□□□□ -0.27
SCAF11-206ENST00000474828 SSBP2P81877 361 aaPredicted RBP13.34□□□□□ -0.27
SCAF11-206ENST00000474828 SRSF4Q08170 494 aaKnown RBP13.34□□□□□ -0.27
SCAF11-206ENST00000474828 POU2AF1Q16633 256 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 SPANXN2Q5MJ10 180 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 ZNF562Q6V9R5 426 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 FOXRED2Q8IWF2 684 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 SLC38A6Q8IZM9 456 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 TCTEX1D1Q8N7M0 179 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 RNF152Q8N8N0 203 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 TEX45Q8NA69 505 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 TERB2Q8NHR7 220 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 CHPT1Q8WUD6 406 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 ZNF486Q96H40 463 aaPredicted RBP13.34□□□□□ -0.27
SCAF11-206ENST00000474828 SRRQ9GZT4 340 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 FBXL15Q9H469 300 aa13.34□□□□□ -0.27
SCAF11-206ENST00000474828 VWFP04275 2813 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 GPR31O00270 319 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 FCN1O00602 326 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 FCGR3BO75015 233 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 CRYZL1O95825 349 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 IFNA6P05013 189 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 IL6RP08887 468 aaPredicted RBP13.33□□□□□ -0.28
SCAF11-206ENST00000474828 AKAIN1P0CW23 69 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 RND3P61587 244 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 CD83Q01151 205 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 CBX3Q13185 183 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 KLF9Q13886 244 aaPredicted RBP13.33□□□□□ -0.28
SCAF11-206ENST00000474828 TCTEX1D4Q5JR98 221 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 PPP1R27Q86WC6 154 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 Q8N402 240 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 STPG2Q8N412 459 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 GDPD1Q8N9F7 314 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 OR4C16Q8NGL9 310 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 OR4S2Q8NH73 311 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 CD300LFQ8TDQ1 290 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 HARBI1Q96MB7 349 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 OR51J1Q9H342 316 aa13.33□□□□□ -0.28
SCAF11-206ENST00000474828 METTL1Q9UBP6 276 aaKnown RBP13.33□□□□□ -0.28
SCAF11-206ENST00000474828 PKD1L1Q8TDX9 2849 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 FGF2P09038 288 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 VSIG10L2P0DP72 767 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 EGR2P11161 476 aaPredicted RBP13.32□□□□□ -0.28
SCAF11-206ENST00000474828 PPIFP30405 207 aaKnown RBP13.32□□□□□ -0.28
SCAF11-206ENST00000474828 CX3CL1P78423 397 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 CATR1Q13166 79 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 SURF2Q15527 256 aaPredicted RBP13.32□□□□□ -0.28
SCAF11-206ENST00000474828 CNPY1Q3B7I2 92 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 C9orf152Q5JTZ5 239 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 CMTM1Q8IZ96 169 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 PUSL1Q8N0Z8 303 aaKnown RBP13.32□□□□□ -0.28
SCAF11-206ENST00000474828 COMMD1Q8N668 190 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 TCTEX1D2Q8WW35 142 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 GPHA2Q96T91 129 aa13.32□□□□□ -0.28
SCAF11-206ENST00000474828 SDHCQ99643 169 aaPredicted RBP13.32□□□□□ -0.28
SCAF11-206ENST00000474828 ADARB2-AS1A8MUL3 147 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 SHOXO15266 292 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 SLC25A17O43808 307 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms