RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 IL7P13232 177 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 MDKP21741 143 aaPredicted RBP5.53□□□□□ -1.52
LIMD1-204ENST00000474665 THBS3P49746 956 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 PPP5CP53041 499 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 KRTAP10-3P60369 221 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 RPL15P61313 204 aaKnown RBP5.53□□□□□ -1.52
LIMD1-204ENST00000474665 HERV-K104P61576 105 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 TSPAN5P62079 268 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 FOXL1Q12952 345 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 HES1Q14469 280 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 MEF2DQ14814 521 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 TMEM95Q3KNT9 176 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF585BQ52M93 769 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 PHLDA2Q53GA4 152 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 DHRS7BQ6IAN0 325 aaPredicted RBP5.53□□□□□ -1.52
LIMD1-204ENST00000474665 LIAT1Q6ZQX7 453 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 NPBQ8NG41 125 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 LINC01006Q8NI28 216 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 MARCH1Q8TCQ1 289 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 WIPF2Q8TF74 440 aaPredicted RBP5.53□□□□□ -1.52
LIMD1-204ENST00000474665 RTBDNQ9BSG5 229 aaPredicted RBP5.53□□□□□ -1.52
LIMD1-204ENST00000474665 C5orf66Q9H5L9 145 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 C16orf95Q9H693 158 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 TPSG1Q9NRR2 321 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 SLC35D1Q9NTN3 355 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 SERTAD4Q9NUC0 356 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 SLC2A8Q9NY64 477 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 WASHC3Q9Y3C0 194 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 PCLOQ9Y6V0 5065 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 H7C2Y5 167 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 GPR31O00270 319 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 FCGR3BO75015 233 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 PEX14O75381 377 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 SLC22A5O76082 557 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 CRYZL1O95825 349 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 RLN1P04808 185 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 IFNA6P05013 189 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 MC5RP33032 325 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 ARHGDIBP52566 201 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 RAG2P55895 527 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 NDPQ00604 133 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 PJVKQ0ZLH3 352 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 PSG5Q15238 335 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 C5orf64Q2M2E5 130 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 SCGB2B2Q4G0G5 96 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 ABCA11PQ4W5N1 156 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 TMEM177Q53S58 311 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 OR2B11Q5JQS5 317 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 ZNF66Q6ZN08 573 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 IDO2Q6ZQW0 420 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 KCTD9Q7L273 389 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 C16orf82Q7Z2V1 217 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 PDPNQ86YL7 162 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 VKORC1L1Q8N0U8 176 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 TOMM5Q8N4H5 51 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 ZBTB34Q8NCN2 500 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 OR51H1Q8NH63 302 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 TMEM230Q96A57 120 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 ADTRPQ96IZ2 230 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 AKR1E2Q96JD6 320 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 HSD17B10Q99714 261 aaKnown RBP5.52□□□□□ -1.53
LIMD1-204ENST00000474665 HSPB9Q9BQS6 159 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 NPFFR1Q9GZQ6 430 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 FBXL15Q9H469 300 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 SLC2A9Q9NRM0 540 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 PITPNC1Q9UKF7 332 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 TBC1D24Q9ULP9 559 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 GPR132Q9UNW8 380 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 VSIG4Q9Y279 399 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 MOB4Q9Y3A3 225 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 MMP24Q9Y5R2 645 aa5.52□□□□□ -1.53
LIMD1-204ENST00000474665 LINC00854A0A1B0GVQ3 168 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 NCBP2LA6PVI3 153 aaKnown RBP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 DISC1C4P0D8 188 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 RRHO14718 337 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 MPPED1O15442 326 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 NBR2O15453 112 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 RBFOX2O43251 390 aaKnown RBP eCLIP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 FGF16O43320 207 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 SLC25A17O43808 307 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 IGKV1-39P01597 117 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 IGKV1D-39P04432 117 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 CTSDP07339 412 aaPredicted RBP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 IL6RP08887 468 aaPredicted RBP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 EGR2P11161 476 aaPredicted RBP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 F2RP25116 425 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 CD40LGP29965 261 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 CCR6P51684 374 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 PROK1P58294 105 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 RND3P61587 244 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 RPS16P62249 146 aaKnown RBP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 SRSF4Q08170 494 aaKnown RBP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 MMDQ15546 238 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 C10orf99Q6UWK7 81 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 SLC38A6Q8IZM9 456 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 SPAG16Q8N0X2 631 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 ADAD2Q8NCV1 583 aaKnown RBP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 OR8H1Q8NGG4 311 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 OR4C13Q8NGP0 309 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 TCTEX1D2Q8WW35 142 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms