RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 HAPLN4Q86UW8 402 aa5.1□□□□□ -1.59
CLK1-210ENST00000473565 S1PR3Q99500 378 aa5.1□□□□□ -1.59
CLK1-210ENST00000473565 QTRT1Q9BXR0 403 aaKnown RBP5.1□□□□□ -1.59
CLK1-210ENST00000473565 RAB1BQ9H0U4 201 aa5.1□□□□□ -1.59
CLK1-210ENST00000473565 SLC25A32Q9H2D1 315 aa5.1□□□□□ -1.59
CLK1-210ENST00000473565 GAL3ST2Q9H3Q3 398 aa5.1□□□□□ -1.59
CLK1-210ENST00000473565 NCOR1P1Q9H4R4 102 aa5.1□□□□□ -1.59
CLK1-210ENST00000473565 FBN2P35556 2912 aa5.1□□□□□ -1.59
CLK1-210ENST00000473565 TENM4Q6N022 2769 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 A0A1B0GV50 99 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 ZNF705EA8MWA4 302 aaPredicted RBP5.09□□□□□ -1.59
CLK1-210ENST00000473565 RAB29O14966 203 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 UBE2KP61086 200 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 TNFRSF9Q07011 255 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 GPR157Q5UAW9 335 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 HEPN1Q6WQI6 88 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 SLC25A48Q6ZT89 311 aaKnown RBP5.09□□□□□ -1.59
CLK1-210ENST00000473565 C11orf42Q8N5U0 333 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 DDB2Q92466 427 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 PHYHIPLQ96FC7 376 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 MRPL20Q9BYC9 149 aaKnown RBP5.09□□□□□ -1.59
CLK1-210ENST00000473565 LINC00574Q9H8X3 128 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 PSENENQ9NZ42 101 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 NAV3Q8IVL0 2385 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 MFSD2BA6NFX1 497 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 TAAR5O14804 337 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 AGPAT2O15120 278 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 MED6O75586 246 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 OPN1MWP04001 364 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 CT45A6P0DMU7 189 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 CT45A5P0DMU8 189 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 CT45A7P0DMV0 189 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 OPN1MW2P0DN77 364 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 OPN1MW3P0DN78 364 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 PAX6P26367 422 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 RAB7AP51149 207 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 DLX6P56179 175 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 MEF2CQ06413 473 aaPredicted RBP5.09□□□□□ -1.59
CLK1-210ENST00000473565 TMEM155Q4W5P6 130 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 TAS2R3Q9NYW6 316 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 KAAG1Q9UBP8 84 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 PFDN2Q9UHV9 154 aa5.09□□□□□ -1.59
CLK1-210ENST00000473565 TOR1AO14656 332 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 SCO1O75880 301 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 JTBO76095 146 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 SLC25A6P12236 298 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 COX7A1P24310 79 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 RPL23AP62750 156 aaKnown RBP5.08□□□□□ -1.6
CLK1-210ENST00000473565 SRSF3P84103 164 aaKnown RBP5.08□□□□□ -1.6
CLK1-210ENST00000473565 OR8G2PQ6IF36 304 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 UBAC2Q8NBM4 344 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 LINC00052Q96N35 136 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 OR4C12Q96R67 309 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 HRH4Q9H3N8 390 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.08□□□□□ -1.6
CLK1-210ENST00000473565 TMEM140Q9NV12 185 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 PRELID3BQ9Y3B1 194 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 USP9YO00507 2555 aaPredicted RBP5.08□□□□□ -1.6
CLK1-210ENST00000473565 PTPN13Q12923 2485 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 IGHV3-72A0A0B4J1Y9 119 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 SRRM4A7MD48 611 aaKnown RBP5.08□□□□□ -1.6
CLK1-210ENST00000473565 CEBPZOSA8MTT3 80 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 C22orf46C9J442 243 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 EIF3GO75821 320 aaKnown RBP eCLIP5.08□□□□□ -1.6
CLK1-210ENST00000473565 HPRT1P00492 218 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 GAPDHP04406 335 aaKnown RBP5.08□□□□□ -1.6
CLK1-210ENST00000473565 IGHV1-8P0DP01 117 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 MSMO1Q15800 293 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 TMEM182Q6ZP80 229 aaPredicted RBP5.08□□□□□ -1.6
CLK1-210ENST00000473565 OR10X1Q8NGY0 326 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 RHOVQ96L33 236 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 FAM210AQ96ND0 272 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 SLC25A31Q9H0C2 315 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 TMEM231Q9H6L2 316 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 RAB9BQ9NP90 201 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 HSPB7Q9UBY9 170 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 ZANQ9Y493 2812 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 BORCS7-ASMTA0A0B4J1R7 106 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 A0A1W2PRD5 423 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 A0A1W2PRF3 423 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 A0A1W2PRM7 423 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 A6NNC1 897 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 H7C2Y5 167 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 FGF16O43320 207 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 IFNA17P01571 189 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 ATP6V0CP27449 155 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 ARHGDIBP52566 201 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 PXDC1Q5TGL8 231 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 WDR25Q64LD2 544 aaPredicted RBP5.08□□□□□ -1.6
CLK1-210ENST00000473565 DTX2Q86UW9 622 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 STX12Q86Y82 276 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 STPG2Q8N412 459 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 RNF141Q8WVD5 230 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 RAB40CQ96S21 281 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 HINT2Q9BX68 163 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 SLC35D1Q9NTN3 355 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 ONECUT1Q9UBC0 465 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 LPAR3Q9UBY5 353 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 WSB1Q9Y6I7 421 aa5.08□□□□□ -1.6
CLK1-210ENST00000473565 PPIAL4CA0A0B4J2A2 164 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms