RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 SHOXO15266 292 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 SLC22A5O76082 557 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 HSMCR30P0CW71 290 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 CRHBPP24387 322 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 MECP2P51608 486 aaKnown RBP10.34□□□□□ -0.75
CHD3-209ENST00000473376 RPS25P62851 125 aaKnown RBP10.34□□□□□ -0.75
CHD3-209ENST00000473376 FABP5Q01469 135 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 VMA21Q3ZAQ7 101 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 LCN12Q6JVE5 192 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 FAM223AQ8IWN6 122 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 OR5T1Q8NG75 326 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 DDB2Q92466 427 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 SNAPC3Q92966 411 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 ISOC1Q96CN7 298 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 SPATA25Q9BR10 227 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 THAP7Q9BT49 309 aaPredicted RBP10.34□□□□□ -0.75
CHD3-209ENST00000473376 OR2D2Q9H210 308 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 PEMTQ9UBM1 199 aa10.34□□□□□ -0.75
CHD3-209ENST00000473376 TRBV9A0A0B4J1U6 114 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 IFITM5A6NNB3 132 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 MFNGO00587 321 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 CTXN2P0C2S0 81 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 HIST1H1DP16402 221 aaKnown RBP10.33□□□□□ -0.76
CHD3-209ENST00000473376 DTYMKP23919 212 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 LINC00205P59089 165 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 PJVKQ0ZLH3 352 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 DYRK1AQ13627 763 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 TBCEQ15813 527 aaPredicted RBP10.33□□□□□ -0.76
CHD3-209ENST00000473376 PRSS8Q16651 343 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 GTSCR1Q86UQ5 136 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 ADAD2Q8NCV1 583 aaKnown RBP10.33□□□□□ -0.76
CHD3-209ENST00000473376 PALMDQ9NP74 551 aa10.33□□□□□ -0.76
CHD3-209ENST00000473376 A0A0B4J203 849 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 LCE6AA0A183 80 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 SRRM4A7MD48 611 aaKnown RBP10.32□□□□□ -0.76
CHD3-209ENST00000473376 BET1O15155 118 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 OR9G9P0C7N8 305 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 GSTT2P0CG29 244 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 GSTT2BP0CG30 244 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 DUTP33316 252 aaKnown RBP10.32□□□□□ -0.76
CHD3-209ENST00000473376 CLDN12P56749 244 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 MRGPRG-AS1Q2M3A8 158 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 IGSF11Q5DX21 431 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 SLC25A42Q86VD7 318 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 H1FOOQ8IZA3 346 aaPredicted RBP10.32□□□□□ -0.76
CHD3-209ENST00000473376 BVESQ8NE79 360 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 SPIN2AQ99865 258 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 SPIN2BQ9BPZ2 258 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 GINS4Q9BRT9 223 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 RSRP1Q9BUV0 290 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 DCSTAMPQ9H295 470 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 BLOC1S6Q9UL45 172 aa10.32□□□□□ -0.76
CHD3-209ENST00000473376 TRDV1A0A1B0GX56 115 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 MSGN1A6NI15 193 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 MRPS14O60783 128 aaKnown RBP10.31□□□□□ -0.76
CHD3-209ENST00000473376 SCGNO76038 276 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 IFNA6P05013 189 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 CSN3P07498 182 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 SYNJ2BPP57105 145 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 RPEL1Q2QD12 228 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 ZNF367Q7RTV3 350 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 TTC9CQ8N5M4 171 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 NECAP1Q8NC96 275 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 IL17DQ8TAD2 202 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 SRSF12Q8WXF0 261 aaKnown RBP10.31□□□□□ -0.76
CHD3-209ENST00000473376 KCTD12Q96CX2 325 aaKnown RBP10.31□□□□□ -0.76
CHD3-209ENST00000473376 VCX3BQ9H321 246 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 NDUFB11Q9NX14 153 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 COA4Q9NYJ1 87 aa10.31□□□□□ -0.76
CHD3-209ENST00000473376 RBM7Q9Y580 266 aaKnown RBP10.31□□□□□ -0.76
CHD3-209ENST00000473376 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.3□□□□□ -0.76
CHD3-209ENST00000473376 GNB3P16520 340 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 TALDO1P37837 337 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 HSPA13P48723 471 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 AQP4P55087 323 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 CDK10Q15131 360 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 KLK9Q2XQG4 91 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 LINC00322Q6ZN03 302 aaPredicted RBP10.3□□□□□ -0.76
CHD3-209ENST00000473376 MMD2Q8IY49 270 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 VSTM2AQ8TAG5 236 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 PHB2Q99623 299 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 KLK9Q9UKQ9 250 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 PRELID3BQ9Y3B1 194 aa10.3□□□□□ -0.76
CHD3-209ENST00000473376 SHISA3A0PJX4 238 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 ANKRD34BA5PLL1 514 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 TUSC2O75896 110 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 ACTL6BO94805 426 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 HLA-DQB1P01920 261 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 SNRPBP14678 240 aaKnown RBP10.29□□□□□ -0.76
CHD3-209ENST00000473376 RAB3BP20337 219 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 MYL9P24844 172 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 MAS1LP35410 378 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 MAP2K4P45985 399 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 ATP5G2Q06055 141 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 ARFRP1Q13795 201 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 HAGHQ16775 308 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 HES5Q5TA89 166 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 ZNF645Q8N7E2 425 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 C5orf30Q96GV9 206 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 CCDC90BQ9GZT6 254 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms