RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 IL7P13232 177 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 RAG2P55895 527 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 KRTAP24-1Q3LI83 254 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 SCGB2B2Q4G0G5 96 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 ABCA11PQ4W5N1 156 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 ZNF57Q68EA5 555 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 IDO2Q6ZQW0 420 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 ZNF818PQ6ZRF7 136 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 CADM3Q8N126 398 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 C5orf56Q8N8D9 126 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 CCDC71LQ8N9Z2 235 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 OR4D10Q8NGI6 311 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 TCTEX1D2Q8WW35 142 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 C19orf24Q9BVV8 132 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 HRASLSQ9HDD0 168 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 MCUBQ9NWR8 336 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 CLPSL1A2RUU4 121 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 KCNAB3O43448 404 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 CREBL2O60519 120 aaPredicted RBP10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 NDUFA3O95167 84 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 HRASP01112 189 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 CTSDP07339 412 aaPredicted RBP10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 PGAM2P15259 253 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 F2RP25116 425 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 RPS16P62249 146 aaKnown RBP10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 MMDQ15546 238 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 BAK1Q16611 211 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 LIN54Q6MZP7 749 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 GLDNQ6ZMI3 551 aaPredicted RBP10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 FAM71E2Q8N5Q1 922 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 OR51S1Q8NGJ8 323 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 C5orf30Q96GV9 206 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 SDHCQ99643 169 aaPredicted RBP10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 PLEKHA2Q9HB19 425 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 ZNF580Q9UK33 172 aa10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
SPTLC1-204ENST00000469778 LINC00473A8K010 186 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 RRHO14718 337 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 SHOXO15266 292 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 MPPED1O15442 326 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 FCGR3BO75015 233 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 HPRT1P00492 218 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 IGKV1-16P04430 117 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 AMY1AP04745 511 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 FGF2P09038 288 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 RPA2P15927 270 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 C5orf64Q2M2E5 130 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 Q6ZSV7 163 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 SPAG16Q8N0X2 631 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 Q8N9W7 124 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 TEX45Q8NA69 505 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 VSTM2AQ8TAG5 236 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 GON7Q9BXV9 100 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 FXYD6Q9H0Q3 95 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 SLC2A9Q9NRM0 540 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 COPZ2Q9P299 210 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 GPR132Q9UNW8 380 aa10.05□□□□□ -0.8
SPTLC1-204ENST00000469778 ATG12O94817 140 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 CRYZL1O95825 349 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 IGHG2P01859 326 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 HLA-DRB1P01911 266 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 F2RL1P55085 397 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 TAS2R31P59538 309 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 UBE2KP61086 200 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 RPL30P62888 115 aaKnown RBP10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 BLCAPP62952 87 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 RELBQ01201 579 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 PSG5Q15238 335 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 VMA21Q3ZAQ7 101 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 FOXRED2Q8IWF2 684 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 LINC01006Q8NI28 216 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 HARBI1Q96MB7 349 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 COMMD9Q9P000 198 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 KCNIP3Q9Y2W7 256 aa10.04□□□□□ -0.8
SPTLC1-204ENST00000469778 NQO2P16083 231 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 PIGPP57054 158 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 LINC00205P59089 165 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 POU2AF1Q16633 256 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 ZNF562Q6V9R5 426 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 TBC1D26Q86UD7 250 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 PPP1R27Q86WC6 154 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 OR13C8Q8NGS7 320 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 OR4A5Q8NH83 315 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 MARCH1Q8TCQ1 289 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 RITA1Q96K30 269 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 ZNF702PQ9H963 129 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 RNF114Q9Y508 228 aa10.03□□□□□ -0.8
SPTLC1-204ENST00000469778 CUBNO60494 3623 aa10.02□□□□□ -0.8
SPTLC1-204ENST00000469778 H0Y980 276 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 AP4M1O00189 453 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 TNFSF12O43508 249 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 PEX14O75381 377 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 RLN1P04808 185 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 SERPINE2P07093 398 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 BRWD1-AS2P59051 145 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 SRSF2Q01130 221 aaKnown RBP10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 DHODHQ02127 395 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 PLGLAQ15195 96 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 RBMS2Q15434 407 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms