RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 PMF1Q6P1K2 205 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 LCN15Q6UWW0 184 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 Q6ZQT0 140 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 Q6ZQY7 126 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 SPATA24Q86W54 205 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 SLC13A5Q86YT5 568 aaPredicted RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 RPP25LQ8N5L8 163 aaKnown RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 ATPAF2Q8N5M1 289 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 CCDC112Q8NEF3 446 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 OR4C5Q8NGB2 326 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 OR11L1Q8NGX0 322 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 OR10AC1Q8NH08 325 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 MGARPQ8TDB4 240 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 CA5BP1Q8WTZ4 195 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 RSPH1Q8WYR4 309 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 CCDC47Q96A33 483 aaKnown RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 LIMD2Q9BT23 127 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 THUMPD2Q9BTF0 503 aaKnown RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 FAAP24Q9BTP7 215 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 MED18Q9BUE0 208 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 MYH16Q9H6N6 1097 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 CCNB1IP1Q9NPC3 277 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 MED29Q9NX70 200 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 PSMC3IPQ9P2W1 217 aaPredicted RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 ANXA10Q9UJ72 324 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 DNAJC12Q9UKB3 198 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 TFR2Q9UP52 801 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 RRP15Q9Y3B9 282 aaKnown RBP-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 ALG5Q9Y673 324 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 PLXND1Q9Y4D7 1925 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 UNC13BO14795 1591 aa-1.17□□□□□ -2.6
SHQ1-204ENST00000468347 TNS1Q9HBL0 1735 aaKnown RBP-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 CECR2Q9BXF3 1484 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 BIVM-ERCC5R4GMW8 1640 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 DYNC1H1Q14204 4646 aaKnown RBP-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 APOBP04114 4563 aaKnown RBP-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 WDR87Q6ZQQ6 2873 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 IGHV1-58A0A0C4DH39 117 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 A0A0J9YW62 118 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 TRBV10-2A0A0K0K1G8 114 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 LOC730098B7Z3J9 87 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 C21orf140B9A014 251 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 K7EQZ3 153 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 DFFAO00273 331 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 CCL16O15467 120 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ATP8B1O43520 1251 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 NSA2O95478 260 aaKnown RBP-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 EPPINO95925 133 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 MGST1P10620 155 aaKnown RBP-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 CDK2P24941 298 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 CCND2P30279 289 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ALDH3A1P30838 453 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 SPRR1AP35321 89 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ARL2P36404 184 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ETV6P41212 452 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 KDSRQ06136 332 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ELP6Q0PNE2 266 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 IDI1Q13907 227 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 OR4D1Q15615 310 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ZNF56Q15929 161 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 MIAQ16674 131 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 LRRC26Q2I0M4 334 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 C2orf76Q3KRA6 126 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ATP6AP1LQ52LC2 224 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 C9orf64Q5T6V5 341 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 SYT6Q5T7P8 510 aaPredicted RBP-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ARMC12Q5T9G4 340 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 RWDD4Q6NW29 188 aaKnown RBP-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 TTC23LQ6PF05 361 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 C11orf88Q6PI97 169 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 CRLF3Q8IUI8 442 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 NELFCDQ8IXH7 590 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ZNF676Q8N7Q3 588 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 SPATA4Q8NEY3 305 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 OR13C8Q8NGS7 320 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 OR13C2Q8NGS9 318 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 OR13C9Q8NGT0 318 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 ITFG1Q8TB96 612 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 NT5CQ8TCD5 201 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 SFT2D1Q8WV19 159 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 NELFBQ8WX92 580 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 RCN3Q96D15 328 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 TMEM147Q9BVK8 224 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 EBPLQ9BY08 206 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 GTSF1LQ9H1H1 148 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 TMEM165Q9HC07 324 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 TAS2R4Q9NYW5 299 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 PITPNC1Q9UKF7 332 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 CFAP45Q9UL16 551 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 HHLA2Q9UM44 414 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 TNFSF18Q9UNG2 199 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 U3KQV3 271 aa-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 USP9XQ93008 2570 aaPredicted RBP-1.18□□□□□ -2.6
SHQ1-204ENST00000468347 PIK3R4Q99570 1358 aa-1.19□□□□□ -2.6
SHQ1-204ENST00000468347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-1.19□□□□□ -2.6
SHQ1-204ENST00000468347 CTTNBP2Q8WZ74 1663 aa-1.19□□□□□ -2.6
SHQ1-204ENST00000468347 CMYA5Q8N3K9 4069 aa-1.19□□□□□ -2.6
SHQ1-204ENST00000468347 GOLGA8JA6NMD2 632 aa-1.19□□□□□ -2.6
SHQ1-204ENST00000468347 HACD1B0YJ81 288 aa-1.19□□□□□ -2.6
SHQ1-204ENST00000468347 K7EN84 100 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms