RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 PRELID3BQ9Y3B1 194 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 NAV2Q8IVL1 2488 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 TRAV20A0A0B4J274 112 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 CENPVL3A0A0U1RRI6 287 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 A0A1W2PPI3 338 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 A0A1W2PRD5 423 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 A0A1W2PRF3 423 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 A0A1W2PRM7 423 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 IGKV1-16P04430 117 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 SLC25A6P12236 298 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 HTR1DP28221 377 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 G6PCP35575 357 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 NKX2-5P52952 324 aaPredicted RBP10.5□□□□□ -0.73
COL4A1-202ENST00000467182 ZFP69Q49AA0 526 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 MIDNQ504T8 468 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 FAM219AQ8IW50 185 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 OR4S2Q8NH73 311 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 PPP1R1CQ8WVI7 109 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 LHX4Q969G2 390 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 RANBP3Q9H6Z4 567 aaPredicted RBP10.5□□□□□ -0.73
COL4A1-202ENST00000467182 SLC35D1Q9NTN3 355 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 COMMD9Q9P000 198 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 DPM3Q9P2X0 92 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 MMP24Q9Y5R2 645 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 MED13LQ71F56 2210 aa10.5□□□□□ -0.73
COL4A1-202ENST00000467182 FASNP49327 2511 aaKnown RBP10.49□□□□□ -0.73
COL4A1-202ENST00000467182 PIGBOS1A0A0B4J2F0 54 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 IGHV1-3A0A0C4DH29 117 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 SRRM4A7MD48 611 aaKnown RBP10.49□□□□□ -0.73
COL4A1-202ENST00000467182 LEUTXA8MZ59 168 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 H0YIZ8 118 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 GAPDHP04406 335 aaKnown RBP10.49□□□□□ -0.73
COL4A1-202ENST00000467182 IL6RP08887 468 aaPredicted RBP10.49□□□□□ -0.73
COL4A1-202ENST00000467182 CYCSP99999 105 aaKnown RBP10.49□□□□□ -0.73
COL4A1-202ENST00000467182 TAGLNQ01995 201 aaKnown RBP10.49□□□□□ -0.73
COL4A1-202ENST00000467182 RAB32Q13637 225 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 POU2AF1Q16633 256 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 TMEM249Q2WGJ8 235 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 TMEM177Q53S58 311 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 MINOS1Q5TGZ0 78 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 DHRS7BQ6IAN0 325 aaPredicted RBP10.49□□□□□ -0.73
COL4A1-202ENST00000467182 C17orf50Q8WW18 174 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 CFHR4Q92496 578 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 R3HDM4Q96D70 268 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 HIF1ANQ9NWT6 349 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 MINOS1-NBL1R4GNA1 71 aa10.49□□□□□ -0.73
COL4A1-202ENST00000467182 ZNF469Q96JG9 3925 aaPredicted RBP10.49□□□□□ -0.73
COL4A1-202ENST00000467182 A0A1B0GU03 582 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 MARCH11A6NNE9 402 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 TXNL1O43396 289 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 MPC2O95563 127 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 CRYZL1O95825 349 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 KRASP01116 189 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 AVPP01185 164 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 APOA2P02652 100 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 MBPP02686 304 aaPredicted RBP10.48□□□□□ -0.73
COL4A1-202ENST00000467182 OR9G9P0C7N8 305 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 RRASP10301 218 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 LYL1P12980 280 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 GATA3P23771 443 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 PSMB6P28072 239 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 EIF2B2P49770 351 aaKnown RBP10.48□□□□□ -0.73
COL4A1-202ENST00000467182 AKR1C2P52895 323 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 HABP2Q14520 560 aaPredicted RBP10.48□□□□□ -0.73
COL4A1-202ENST00000467182 PDPNQ86YL7 162 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 RPEQ96AT9 228 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 RITA1Q96K30 269 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 SPIN2AQ99865 258 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 SPIN2BQ9BPZ2 258 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 RNF126Q9BV68 326 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 C11orf1Q9H5F2 150 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 GSKIPQ9P0R6 139 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 CACNG5Q9UF02 275 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 TBL2Q9Y4P3 447 aaKnown RBP10.48□□□□□ -0.73
COL4A1-202ENST00000467182 AUP1Q9Y679 476 aa10.48□□□□□ -0.73
COL4A1-202ENST00000467182 SLC25A4P12235 298 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 NQO2P16083 231 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 EPHA1P21709 976 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 MC5RP33032 325 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 ID3Q02535 119 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 SMCO1Q147U7 214 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 RTL8BQ17RB0 113 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 LRRC37A5PQ49AS3 106 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 LAMTOR1Q6IAA8 161 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 C11orf87Q6NUJ2 197 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 VKORC1L1Q8N0U8 176 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 CIARTQ8N365 385 aaPredicted RBP10.47□□□□□ -0.73
COL4A1-202ENST00000467182 GRPEL2Q8TAA5 225 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 RRNAD1Q96FB5 475 aaKnown RBP10.47□□□□□ -0.73
COL4A1-202ENST00000467182 HYLS1Q96M11 299 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 C7orf69Q9H7B7 122 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 COA4Q9NYJ1 87 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 WASHC3Q9Y3C0 194 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 HILPDAQ9Y5L2 63 aa10.47□□□□□ -0.73
COL4A1-202ENST00000467182 IGHV3-72A0A0B4J1Y9 119 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 IGHV1-69DA0A0B4J2H0 117 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 FAM90A9PA6NNJ1 464 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms