RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 S100A16Q96FQ6 103 aaKnown RBP10.09□□□□□ -0.79
XRN1-203ENST00000463916 HARBI1Q96MB7 349 aa10.09□□□□□ -0.79
XRN1-203ENST00000463916 GPHA2Q96T91 129 aa10.09□□□□□ -0.79
XRN1-203ENST00000463916 TMEM65Q6PI78 240 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 C4orf3Q8WVX3 66 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 UBE2E2Q96LR5 201 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 OR5B12Q96R08 314 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 NECAP2Q9NVZ3 263 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 SHOXO15266 292 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 CRYZL1O95825 349 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 EIF4EP06730 217 aaKnown RBP10.08□□□□□ -0.8
XRN1-203ENST00000463916 HOXD3P31249 432 aaPredicted RBP10.08□□□□□ -0.8
XRN1-203ENST00000463916 LGALS7P47929 136 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 BRWD1-AS2P59051 145 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 EIF4EBP1Q13541 118 aaPredicted RBP10.08□□□□□ -0.8
XRN1-203ENST00000463916 FXYD3Q14802 87 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 CTF1Q16619 201 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 RTL8BQ17RB0 113 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 AKIRIN2Q53H80 203 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 IDO2Q6ZQW0 420 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 AURKAIP1Q9NWT8 199 aaPredicted RBP10.08□□□□□ -0.8
XRN1-203ENST00000463916 COMMD3Q9UBI1 195 aa10.08□□□□□ -0.8
XRN1-203ENST00000463916 FOXA2Q9Y261 457 aaPredicted RBP10.08□□□□□ -0.8
XRN1-203ENST00000463916 RBMX2Q9Y388 322 aaKnown RBP10.08□□□□□ -0.8
XRN1-203ENST00000463916 I3L521 148 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 AADACP22760 399 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 FCGR2CP31995 323 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 RAB25P57735 213 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 TAS2R20P59543 309 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 ARPC4P59998 168 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 GNB1P62873 340 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 TAGLNQ01995 201 aaKnown RBP10.07□□□□□ -0.8
XRN1-203ENST00000463916 ACTBL2Q562R1 376 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 OR2B11Q5JQS5 317 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 UNQ5815/PRO19632Q6UWF5 114 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 OR11H1Q8NG94 326 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 GRPEL2Q8TAA5 225 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 ARPC1AQ92747 370 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 ADTRPQ96IZ2 230 aa10.07□□□□□ -0.8
XRN1-203ENST00000463916 ALX4Q9H161 411 aaPredicted RBP10.07□□□□□ -0.8
XRN1-203ENST00000463916 FCGR3BO75015 233 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 FHL3Q13643 280 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 TMEM69Q5SWH9 247 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 ASPHD1Q5U4P2 390 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 ANKRD13BQ86YJ7 626 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 KCTD12Q96CX2 325 aaKnown RBP10.06□□□□□ -0.8
XRN1-203ENST00000463916 MS4A10Q96PG2 267 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 VSIG4Q9Y279 399 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 TNCP24821 2201 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 RRASP10301 218 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 TMEM267Q0VDI3 215 aaPredicted RBP10.06□□□□□ -0.8
XRN1-203ENST00000463916 GPR107Q5VW38 600 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 KCTD9Q7L273 389 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 OR5AP2Q8NGF4 316 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 CCL28Q9NRJ3 127 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 TAS2R8Q9NYW2 309 aa10.06□□□□□ -0.8
XRN1-203ENST00000463916 GABARAPO95166 117 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 CNIH1O95406 144 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 DUS4LO95620 317 aaKnown RBP10.05□□□□□ -0.8
XRN1-203ENST00000463916 RFX2P48378 723 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 OVCH2Q7RTZ1 564 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 VKORC1L1Q8N0U8 176 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 TCTEX1D1Q8N7M0 179 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 OR5T1Q8NG75 326 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 SECTM1Q8WVN6 248 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 TNFSF12O43508 249 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 HPGDSO60760 199 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 SLC22A5O76082 557 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 PPYP01298 95 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 APELAP0DMC3 54 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 ELK1P19419 428 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 CBX5P45973 191 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 ALDH3B2P48448 385 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 UBE2KP61086 200 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 RUNX1Q01196 453 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 EGFEM1PQ0D2K5 195 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 CBX3Q13185 183 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 REC114Q7Z4M0 266 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 MFSD4AQ8N468 514 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 OR1N2Q8NGR9 330 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
XRN1-203ENST00000463916 ANAPC10Q9UM13 185 aa10.05□□□□□ -0.8
XRN1-203ENST00000463916 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
XRN1-203ENST00000463916 SAA1P0DJI8 122 aaPredicted RBP10.04□□□□□ -0.8
XRN1-203ENST00000463916 PRSS8Q16651 343 aa10.04□□□□□ -0.8
XRN1-203ENST00000463916 LYSMD2Q8IV50 215 aa10.04□□□□□ -0.8
XRN1-203ENST00000463916 TEX45Q8NA69 505 aa10.04□□□□□ -0.8
XRN1-203ENST00000463916 OR5M8Q8NGP6 311 aa10.04□□□□□ -0.8
XRN1-203ENST00000463916 HSD17B10Q99714 261 aaKnown RBP10.04□□□□□ -0.8
XRN1-203ENST00000463916 DCUN1D5Q9BTE7 237 aa10.04□□□□□ -0.8
XRN1-203ENST00000463916 MRPS26Q9BYN8 205 aaKnown RBP10.04□□□□□ -0.8
XRN1-203ENST00000463916 IFT46Q9NQC8 304 aa10.04□□□□□ -0.8
XRN1-203ENST00000463916 MRPS7Q9Y2R9 242 aaKnown RBP10.04□□□□□ -0.8
XRN1-203ENST00000463916 WI2-2373I1.2A0A1W2PRP0 233 aa10.03□□□□□ -0.8
XRN1-203ENST00000463916 IGHV3-11P01762 117 aa10.03□□□□□ -0.8
XRN1-203ENST00000463916 APOA1P02647 267 aa10.03□□□□□ -0.8
XRN1-203ENST00000463916 RORCP51449 518 aa10.03□□□□□ -0.8
XRN1-203ENST00000463916 FXYD4P59646 89 aa10.03□□□□□ -0.8
XRN1-203ENST00000463916 CDK10Q15131 360 aa10.03□□□□□ -0.8
XRN1-203ENST00000463916 VMA21Q3ZAQ7 101 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms