RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ODAMA1E959 279 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 PTP4A3O75365 173 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 UPK3AO75631 287 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 SCTP09683 121 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 PPIAL4GP0DN37 164 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 DNASE2BQ8WZ79 361 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 OPN3Q9H1Y3 402 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-205ENST00000461221 NPIPB8E9PQR5 432 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 TYMSP04818 313 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 PCP4P48539 62 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 A0A1B0GW15 77 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 DXOO77932 396 aaKnown RBP7.74□□□□□ -1.17
BRCA1-205ENST00000461221 CD300CQ08708 224 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 PMS2CLQ68D20 193 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 CLDND2Q8NHS1 167 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 DUSP15Q9H1R2 295 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-205ENST00000461221 NUP98P52948 1817 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 A0A1W2PP11 408 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 NPIPB9F8W1W9 429 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 NPIPB7O75200 414 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 NMBP08949 121 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 GLIPR1P48060 266 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 PDLIM4P50479 330 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 DCAF12L2Q5VW00 463 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 CLEC7AQ9BXN2 247 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 CBLN4Q9NTU7 201 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 TRAV8-6A0A0B4J262 113 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 H0YL77 283 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 VENTXO95231 258 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 P2RY4P51582 365 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF324BQ6AW86 544 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-205ENST00000461221 GOLT1AQ6ZVE7 132 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 CENPVQ7Z7K6 275 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-205ENST00000461221 CHODLQ9H9P2 273 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 LOC105371242A0A075B767 164 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 TRBV5-5A0A0J9YX44 114 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 ABHD12Q8N2K0 398 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 KIR3DL3Q8N743 410 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 GATAD1Q8WUU5 269 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 NABP2Q9BQ15 211 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 RPP25Q9BUL9 199 aaKnown RBP7.73□□□□□ -1.17
BRCA1-205ENST00000461221 TLNRD1Q9H1K6 362 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 MARCH11A6NNE9 402 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 FOXI3A8MTJ6 420 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-205ENST00000461221 GCM2O75603 506 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF660Q6AZW8 331 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-205ENST00000461221 UNQ9370/PRO34162Q6UXP9 181 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 OR5A1Q8NGJ0 315 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 PDE4DIPQ5VU43 2346 aa7.73□□□□□ -1.17
BRCA1-205ENST00000461221 A0A0J9YW62 118 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 A0A1B0GV90 55 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 ISG15P05161 165 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 CTSSP25774 331 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 GCHFRP30047 84 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 RND3P61587 244 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 WNT2BQ93097 391 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 SCGB3A1Q96QR1 104 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 TUBA4BQ9H853 241 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 KLHDC2Q9Y2U9 406 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 DPRXA6NFQ7 191 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 HRKO00198 91 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 SIGLEC14Q08ET2 396 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 ZAR1Q86SH2 424 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 TCF19Q9Y242 345 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 SYNGR3O43761 229 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 NANOS3P60323 173 aaKnown RBP7.72□□□□□ -1.17
BRCA1-205ENST00000461221 AQP3Q92482 292 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 PSMG3Q9BT73 122 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-205ENST00000461221 TMEM74BQ9NUR3 256 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 RGPD1P0DJD0 1748 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 HAX1O00165 279 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 ZG16O60844 167 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 FOXH1O75593 365 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 PTGDSP41222 190 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 TMPRSS3P57727 454 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 TMEM95Q3KNT9 176 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 DLL3Q9NYJ7 618 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 TRBV5-3A0A0A0MS03 114 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 COX5BP10606 129 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 SAMD13Q5VXD3 122 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 FAM219BQ5XKK7 198 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 PHLDA1Q8WV24 401 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-205ENST00000461221 RNF115Q9Y4L5 304 aa7.72□□□□□ -1.17
BRCA1-205ENST00000461221 C9JCJ5 164 aa7.71□□□□□ -1.17
BRCA1-205ENST00000461221 ITGBL1O95965 494 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-205ENST00000461221 ERGP11308 486 aa7.71□□□□□ -1.17
BRCA1-205ENST00000461221 LY6EQ16553 131 aa7.71□□□□□ -1.17
BRCA1-205ENST00000461221 KIAA1644Q3SXP7 199 aa7.71□□□□□ -1.17
BRCA1-205ENST00000461221 CENPWQ5EE01 88 aa7.71□□□□□ -1.17
BRCA1-205ENST00000461221 C1orf100Q5SVJ3 147 aa7.71□□□□□ -1.17
BRCA1-205ENST00000461221 Q6AWC8 147 aa7.71□□□□□ -1.17
BRCA1-205ENST00000461221 CYP2G1PQ6ZSU1 146 aa7.71□□□□□ -1.17
BRCA1-205ENST00000461221 TMEM106BQ9NUM4 274 aa7.71□□□□□ -1.17
BRCA1-205ENST00000461221 NPIPB4C9JG80 1138 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 DANCRP0C864 163 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 PAX1P15863 534 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 C2orf68Q2NKX9 166 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 SLC25A47Q6Q0C1 308 aa7.71□□□□□ -1.18
BRCA1-205ENST00000461221 SDHCQ99643 169 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-205ENST00000461221 C1QL1O75973 258 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms