RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 TPRKBQ9Y3C4 175 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 DNAH1Q9P2D7 4330 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 H0Y980 276 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 SHOXO15266 292 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 RGS10O43665 173 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 DIRAS3O95661 229 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 CSN3P07498 182 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 AQP4P55087 323 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 MRPS15P82914 257 aaKnown RBP11.19□□□□□ -0.62
SMPD4-216ENST00000461187 TAGLNQ01995 201 aaKnown RBP11.19□□□□□ -0.62
SMPD4-216ENST00000461187 MAFIPQ8WZ33 124 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 DDB2Q92466 427 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 ISOC1Q96CN7 298 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 RAB3CQ96E17 227 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 USMG5Q96IX5 58 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 MGLLQ99685 303 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 COA4Q9NYJ1 87 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
SMPD4-216ENST00000461187 NKX1-2Q9UD57 310 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-216ENST00000461187 MSGN1A6NI15 193 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 MFNGO00587 321 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 APELAP0DMC3 54 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 GNB3P16520 340 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 RANBP1P43487 201 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 PSMD7P51665 324 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 CBX3Q13185 183 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 HAGHQ16775 308 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 RTL8BQ17RB0 113 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 ADAD2Q8NCV1 583 aaKnown RBP11.18□□□□□ -0.62
SMPD4-216ENST00000461187 OR10R2Q8NGX6 335 aa11.18□□□□□ -0.62
SMPD4-216ENST00000461187 ZNF230Q9UIE0 474 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-216ENST00000461187 SHISA3A0PJX4 238 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 IZUMO1RA6ND01 250 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 RAB27BO00194 218 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 RRASP10301 218 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 DUTP33316 252 aaKnown RBP11.17□□□□□ -0.62
SMPD4-216ENST00000461187 MAP2K4P45985 399 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 MECP2P51608 486 aaKnown RBP11.17□□□□□ -0.62
SMPD4-216ENST00000461187 UBE2KP61086 200 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 PRSS8Q16651 343 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 RPEL1Q2QD12 228 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 IDO2Q6ZQW0 420 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 PRSS48Q7RTY5 328 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 TEX45Q8NA69 505 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 NRG4Q8WWG1 115 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 PHB2Q99623 299 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 SPATA25Q9BR10 227 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 CCDC90BQ9GZT6 254 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 ACOT13Q9NPJ3 140 aa11.17□□□□□ -0.62
SMPD4-216ENST00000461187 A0A075B6Q4 140 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 LINC00473A8K010 186 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 OR2A4O95047 310 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 CRYZL1O95825 349 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 OR9G9P0C7N8 305 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 HIST1H1DP16402 221 aaKnown RBP11.16□□□□□ -0.62
SMPD4-216ENST00000461187 CRHBPP24387 322 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 GADD45AP24522 165 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 OR10A3P58181 314 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 TNXAQ16473 311 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 TATDN3Q17R31 274 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 VMA21Q3ZAQ7 101 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 LCN12Q6JVE5 192 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 Q6ZS49 121 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 GTSCR1Q86UQ5 136 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-216ENST00000461187 Q8N402 240 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 SRSF12Q8WXF0 261 aaKnown RBP11.16□□□□□ -0.62
SMPD4-216ENST00000461187 SNAPC3Q92966 411 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 ADTRPQ96IZ2 230 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 GINS4Q9BRT9 223 aa11.16□□□□□ -0.62
SMPD4-216ENST00000461187 RBM7Q9Y580 266 aaKnown RBP11.16□□□□□ -0.62
SMPD4-216ENST00000461187 IGKV1D-8A0A087WSZ0 117 aa11.15□□□□□ -0.62
SMPD4-216ENST00000461187 TRAV1-2A0A0B4J238 106 aa11.15□□□□□ -0.62
SMPD4-216ENST00000461187 ANKRD65E5RJM6 399 aa11.15□□□□□ -0.62
SMPD4-216ENST00000461187 RAB6AP20340 208 aa11.15□□□□□ -0.62
SMPD4-216ENST00000461187 ZNF45Q02386 682 aa11.15□□□□□ -0.62
SMPD4-216ENST00000461187 SSX1Q16384 188 aa11.15□□□□□ -0.62
SMPD4-216ENST00000461187 OSR1Q8TAX0 266 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-216ENST00000461187 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
SMPD4-216ENST00000461187 AKIP1Q9NQ31 210 aa11.15□□□□□ -0.62
SMPD4-216ENST00000461187 ELF5Q9UKW6 265 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-216ENST00000461187 EPPK1P58107 5090 aaKnown RBP11.15□□□□□ -0.62
SMPD4-216ENST00000461187 TRBV9A0A0B4J1U6 114 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 A0A0B4J203 849 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 IFITM5A6NNB3 132 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 BMPR1BO00238 502 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 PDCD5O14737 125 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 PRH1P02810 166 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 RHOGP84095 191 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 ADAMTSL5Q6ZMM2 481 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 ACOT12Q8WYK0 555 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 ZNF430Q9H8G1 570 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-216ENST00000461187 PEMTQ9UBM1 199 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 HYDINQ4G0P3 5121 aa11.14□□□□□ -0.63
SMPD4-216ENST00000461187 FAM223BA6NKX1 122 aa11.13□□□□□ -0.63
SMPD4-216ENST00000461187 MPPED1O15442 326 aa11.13□□□□□ -0.63
SMPD4-216ENST00000461187 SAA1P0DJI8 122 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-216ENST00000461187 TALDO1P37837 337 aa11.13□□□□□ -0.63
SMPD4-216ENST00000461187 ARFRP1Q13795 201 aa11.13□□□□□ -0.63
SMPD4-216ENST00000461187 EXOSC2Q13868 293 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms