RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 RIPPLY2Q5TAB7 128 aa10.02□□□□□ -0.8
LTBR-203ENST00000441074 LINC00696Q6ZRV3 163 aa10.02□□□□□ -0.8
LTBR-203ENST00000441074 TCF23Q7RTU1 214 aa10.02□□□□□ -0.8
LTBR-203ENST00000441074 TMPRSS7Q7RTY8 843 aa10.02□□□□□ -0.8
LTBR-203ENST00000441074 OR5P3Q8WZ94 311 aa10.02□□□□□ -0.8
LTBR-203ENST00000441074 TMEM147Q9BVK8 224 aa10.02□□□□□ -0.8
LTBR-203ENST00000441074 OR2H1Q9GZK4 316 aa10.02□□□□□ -0.8
LTBR-203ENST00000441074 PTPRBP23467 1997 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 YLPM1P49750 1951 aaKnown RBP10.02□□□□□ -0.81
LTBR-203ENST00000441074 EML6Q6ZMW3 1958 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 NCOR2Q9Y618 2525 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 C20orf202A1L168 122 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 PINLYPA6NC86 204 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 SERF1AO75920 110 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 SYNGR4O95473 234 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 C1QTNF9P0C862 333 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 YRDCQ86U90 279 aaKnown RBP10.02□□□□□ -0.81
LTBR-203ENST00000441074 VASH2Q86V25 355 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 ZDHHC23Q8IYP9 409 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 ORAOV1Q8WV07 137 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 SPSB4Q96A44 273 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 SFRP2Q96HF1 295 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 CIB3Q96Q77 187 aaPredicted RBP10.02□□□□□ -0.81
LTBR-203ENST00000441074 HS3ST6Q96QI5 342 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 FOXB1Q99853 325 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 ZPBPQ9BS86 351 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 CHODLQ9H9P2 273 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 SLC45A2Q9UMX9 530 aa10.02□□□□□ -0.81
LTBR-203ENST00000441074 DSPP15924 2871 aaKnown RBP10.02□□□□□ -0.81
LTBR-203ENST00000441074 B4GALT1P15291 398 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 CRISP2P16562 243 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 SRD5A2P31213 254 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 PSG4Q00888 419 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 ZNF585BQ52M93 769 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 AAED1Q7RTV5 226 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 MYPOPQ86VE0 399 aaPredicted RBP10.01□□□□□ -0.81
LTBR-203ENST00000441074 TRAV9-1A0A075B6T8 112 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 MDFIC2A0A1B0GVS7 189 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 F6UZH7 168 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 HSPB6O14558 160 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 ITGB1BP1O14713 200 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 MMP23AO75900 390 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 CLDN1O95832 211 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 SERPINA7P05543 415 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 PATE4P0C8F1 98 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 PMP22Q01453 160 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 MMDQ15546 238 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 C22orf15Q8WYQ4 148 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 PRDM14Q9GZV8 571 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 KCNIP2Q9NS61 270 aa10.01□□□□□ -0.81
LTBR-203ENST00000441074 CACNA1AO00555 2505 aa10□□□□□ -0.81
LTBR-203ENST00000441074 ZNF716A6NP11 495 aa10□□□□□ -0.81
LTBR-203ENST00000441074 NDUFB4O95168 129 aa10□□□□□ -0.81
LTBR-203ENST00000441074 NDUFB8O95169 186 aa10□□□□□ -0.81
LTBR-203ENST00000441074 IGLV2-14P01704 120 aa10□□□□□ -0.81
LTBR-203ENST00000441074 KITLGP21583 273 aa10□□□□□ -0.81
LTBR-203ENST00000441074 CTRLP40313 264 aa10□□□□□ -0.81
LTBR-203ENST00000441074 Q0VG73 95 aa10□□□□□ -0.81
LTBR-203ENST00000441074 TMEM249Q2WGJ8 235 aa10□□□□□ -0.81
LTBR-203ENST00000441074 NRN1LQ496H8 165 aa10□□□□□ -0.81
LTBR-203ENST00000441074 LEMD1Q68G75 181 aa10□□□□□ -0.81
LTBR-203ENST00000441074 C20orf204Q6ZNR8 217 aa10□□□□□ -0.81
LTBR-203ENST00000441074 RNASE8Q8TDE3 154 aaKnown RBP10□□□□□ -0.81
LTBR-203ENST00000441074 ALKBH3Q96Q83 286 aaPredicted RBP10□□□□□ -0.81
LTBR-203ENST00000441074 RNF2Q99496 336 aa10□□□□□ -0.81
LTBR-203ENST00000441074 SCNM1Q9BWG6 230 aa10□□□□□ -0.81
LTBR-203ENST00000441074 LIN7CQ9NUP9 197 aaKnown RBP10□□□□□ -0.81
LTBR-203ENST00000441074 TRAV39A0A0B4J263 110 aa10□□□□□ -0.81
LTBR-203ENST00000441074 NKX6-3A6NJ46 265 aa10□□□□□ -0.81
LTBR-203ENST00000441074 NPIPB11E5RHQ5 1161 aa10□□□□□ -0.81
LTBR-203ENST00000441074 RBFOX2O43251 390 aaKnown RBP eCLIP10□□□□□ -0.813e-10■■■■□ 19.3
LTBR-203ENST00000441074 KLF3P57682 345 aaPredicted RBP10□□□□□ -0.81
LTBR-203ENST00000441074 CARD18P57730 90 aa10□□□□□ -0.81
LTBR-203ENST00000441074 B3GALT5-AS1P59052 145 aa10□□□□□ -0.81
LTBR-203ENST00000441074 STPG4Q8N801 248 aa10□□□□□ -0.81
LTBR-203ENST00000441074 ZNF709Q8N972 641 aa10□□□□□ -0.81
LTBR-203ENST00000441074 ZNF114Q8NC26 417 aa10□□□□□ -0.81
LTBR-203ENST00000441074 GMPPAQ96IJ6 420 aaPredicted RBP10□□□□□ -0.81
LTBR-203ENST00000441074 SGCZQ96LD1 299 aa10□□□□□ -0.81
LTBR-203ENST00000441074 C1QTNF5Q9BXJ0 243 aa10□□□□□ -0.81
LTBR-203ENST00000441074 SAMD10Q9BYL1 202 aa10□□□□□ -0.81
LTBR-203ENST00000441074 IL36RNQ9UBH0 155 aa10□□□□□ -0.81
LTBR-203ENST00000441074 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.99□□□□□ -0.81
LTBR-203ENST00000441074 CCL25O15444 150 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 TRAPPC6AO75865 159 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 CRYAAP02489 173 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 EGR1P18146 543 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 PTTG1IPP53801 180 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 CEACAM16Q2WEN9 425 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 BAGE3Q86Y29 109 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 BAGE2Q86Y30 109 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 C1orf174Q8IYL3 243 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 NPCDR1Q9BY65 106 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 MRPL18Q9H0U6 180 aaKnown RBP9.99□□□□□ -0.81
LTBR-203ENST00000441074 UQCR10Q9UDW1 63 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 PPP1R3CQ9UQK1 317 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 MED13Q9UHV7 2174 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 A0A1W2PR80 420 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 PMS2P5A8MQ11 134 aa9.99□□□□□ -0.81
LTBR-203ENST00000441074 TRAPPC2LH3BP13 241 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms