RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 OR9G4Q8NGQ1 327 aa13.84□□□□□ -0.19
GTF3A-204ENST00000438571 THAP7Q9BT49 309 aaPredicted RBP13.84□□□□□ -0.19
GTF3A-204ENST00000438571 TINAGL1Q9GZM7 467 aaPredicted RBP13.84□□□□□ -0.19
GTF3A-204ENST00000438571 CCDC90BQ9GZT6 254 aa13.84□□□□□ -0.19
GTF3A-204ENST00000438571 A0A075B6Q4 140 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 TRBV6-7A0A0A0MS04 114 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 IZUMO1RA6ND01 250 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 SHOXO15266 292 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 GNB3P16520 340 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 SSX1Q16384 188 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 TMEM177Q53S58 311 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 RAB3CQ96E17 227 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 PALMDQ9NP74 551 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 COA4Q9NYJ1 87 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 ELF5Q9UKW6 265 aaPredicted RBP13.83□□□□□ -0.2
GTF3A-204ENST00000438571 TPRKBQ9Y3C4 175 aa13.83□□□□□ -0.2
GTF3A-204ENST00000438571 LINC00473A8K010 186 aa13.82□□□□□ -0.2
GTF3A-204ENST00000438571 A8MZ25 164 aa13.82□□□□□ -0.2
GTF3A-204ENST00000438571 CSN3P07498 182 aa13.82□□□□□ -0.2
GTF3A-204ENST00000438571 SERPINB10P48595 397 aa13.82□□□□□ -0.2
GTF3A-204ENST00000438571 TRAM1Q15629 374 aa13.82□□□□□ -0.2
GTF3A-204ENST00000438571 ZNF343Q6P1L6 599 aa13.82□□□□□ -0.2
GTF3A-204ENST00000438571 SGPP2Q8IWX5 399 aa13.82□□□□□ -0.2
GTF3A-204ENST00000438571 DDB2Q92466 427 aa13.82□□□□□ -0.2
GTF3A-204ENST00000438571 MGLLQ99685 303 aa13.82□□□□□ -0.2
GTF3A-204ENST00000438571 A0A0G2JLM5 398 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 LCE6AA0A183 80 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 RAB27BO00194 218 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 PRH1P02810 166 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 CRHBPP24387 322 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 PSMA1P25786 263 aaKnown RBP13.81□□□□□ -0.2
GTF3A-204ENST00000438571 LGALS7P47929 136 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 TNXAQ16473 311 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 ADAD2Q8NCV1 583 aaKnown RBP13.81□□□□□ -0.2
GTF3A-204ENST00000438571 OR10R2Q8NGX6 335 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 OR10J5Q8NHC4 309 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 PHB2Q99623 299 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 RETNQ9HD89 108 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 PEF1Q9UBV8 284 aaKnown RBP13.81□□□□□ -0.2
GTF3A-204ENST00000438571 RAB22AQ9UL26 194 aa13.81□□□□□ -0.2
GTF3A-204ENST00000438571 SMIM30A4D0T7 59 aa13.8□□□□□ -0.2
GTF3A-204ENST00000438571 MSGN1A6NI15 193 aa13.8□□□□□ -0.2
GTF3A-204ENST00000438571 J3QRK9 145 aa13.8□□□□□ -0.2
GTF3A-204ENST00000438571 CRYZL1O95825 349 aa13.8□□□□□ -0.2
GTF3A-204ENST00000438571 HIST1H1DP16402 221 aaKnown RBP13.8□□□□□ -0.2
GTF3A-204ENST00000438571 EDN2P20800 178 aa13.8□□□□□ -0.2
GTF3A-204ENST00000438571 DUTP33316 252 aaKnown RBP13.8□□□□□ -0.2
GTF3A-204ENST00000438571 MRPS15P82914 257 aaKnown RBP13.8□□□□□ -0.2
GTF3A-204ENST00000438571 TAGLNQ01995 201 aaKnown RBP13.8□□□□□ -0.2
GTF3A-204ENST00000438571 ZNF45Q02386 682 aa13.8□□□□□ -0.2
GTF3A-204ENST00000438571 HAGHQ16775 308 aa13.8□□□□□ -0.2
GTF3A-204ENST00000438571 C10orf55Q5SWW7 151 aa13.8□□□□□ -0.2
GTF3A-204ENST00000438571 ADAMTSL5Q6ZMM2 481 aa13.8□□□□□ -0.2
GTF3A-204ENST00000438571 SRSF12Q8WXF0 261 aaKnown RBP13.8□□□□□ -0.2
GTF3A-204ENST00000438571 ALMS1Q8TCU4 4167 aa13.79□□□□□ -0.2
GTF3A-204ENST00000438571 BRI3O95415 125 aa13.79□□□□□ -0.2
GTF3A-204ENST00000438571 RTL8BQ17RB0 113 aa13.79□□□□□ -0.2
GTF3A-204ENST00000438571 C19orf35Q6ZS72 473 aa13.79□□□□□ -0.2
GTF3A-204ENST00000438571 PRSS48Q7RTY5 328 aa13.79□□□□□ -0.2
GTF3A-204ENST00000438571 NR2C2APQ86WQ0 139 aa13.79□□□□□ -0.2
GTF3A-204ENST00000438571 H1FOOQ8IZA3 346 aaPredicted RBP13.79□□□□□ -0.2
GTF3A-204ENST00000438571 ISOC1Q96CN7 298 aa13.79□□□□□ -0.2
GTF3A-204ENST00000438571 RBM7Q9Y580 266 aaKnown RBP13.79□□□□□ -0.2
GTF3A-204ENST00000438571 BMPR1BO00238 502 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 OR9G9P0C7N8 305 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 SAA1P0DJI8 122 aaPredicted RBP13.78□□□□□ -0.2
GTF3A-204ENST00000438571 UBE2KP61086 200 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 PRSS8Q16651 343 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 RPEL1Q2QD12 228 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 ACOT12Q8WYK0 555 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 TMEM68Q96MH6 324 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 SPATA25Q9BR10 227 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 GINS4Q9BRT9 223 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 ACOT13Q9NPJ3 140 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 AKIP1Q9NQ31 210 aa13.78□□□□□ -0.2
GTF3A-204ENST00000438571 IFITM5A6NNB3 132 aa13.77□□□□□ -0.21
GTF3A-204ENST00000438571 H0Y980 276 aa13.77□□□□□ -0.21
GTF3A-204ENST00000438571 AADACP22760 399 aa13.77□□□□□ -0.21
GTF3A-204ENST00000438571 CBX3Q13185 183 aa13.77□□□□□ -0.21
GTF3A-204ENST00000438571 EXOSC2Q13868 293 aaKnown RBP13.77□□□□□ -0.21
GTF3A-204ENST00000438571 TBCEQ15813 527 aaPredicted RBP13.77□□□□□ -0.21
GTF3A-204ENST00000438571 VMA21Q3ZAQ7 101 aa13.77□□□□□ -0.21
GTF3A-204ENST00000438571 OR2B11Q5JQS5 317 aa13.77□□□□□ -0.21
GTF3A-204ENST00000438571 TEX45Q8NA69 505 aa13.77□□□□□ -0.21
GTF3A-204ENST00000438571 WFDC10AQ9H1F0 79 aa13.77□□□□□ -0.21
GTF3A-204ENST00000438571 ZNF430Q9H8G1 570 aaPredicted RBP13.77□□□□□ -0.21
GTF3A-204ENST00000438571 PLEKHA3Q9HB20 300 aa13.77□□□□□ -0.21
GTF3A-204ENST00000438571 GADD45AP24522 165 aa13.76□□□□□ -0.21
GTF3A-204ENST00000438571 MECP2P51608 486 aaKnown RBP13.76□□□□□ -0.21
GTF3A-204ENST00000438571 RPL30P62888 115 aaKnown RBP13.76□□□□□ -0.21
GTF3A-204ENST00000438571 RHOGP84095 191 aa13.76□□□□□ -0.21
GTF3A-204ENST00000438571 ARFRP1Q13795 201 aa13.76□□□□□ -0.21
GTF3A-204ENST00000438571 USMG5Q96IX5 58 aa13.76□□□□□ -0.21
GTF3A-204ENST00000438571 FAM110AQ9BQ89 295 aa13.76□□□□□ -0.21
GTF3A-204ENST00000438571 SELENOKQ9Y6D0 94 aa13.76□□□□□ -0.21
GTF3A-204ENST00000438571 TRAV1-2A0A0B4J238 106 aa13.75□□□□□ -0.21
GTF3A-204ENST00000438571 MPPED1O15442 326 aa13.75□□□□□ -0.21
GTF3A-204ENST00000438571 DIRAS3O95661 229 aa13.75□□□□□ -0.21
GTF3A-204ENST00000438571 RRASP10301 218 aa13.75□□□□□ -0.21
GTF3A-204ENST00000438571 RAB6AP20340 208 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms