RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 BORCS5Q969J3 196 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 HARBI1Q96MB7 349 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 TSNAXQ99598 290 aaKnown RBP11.57□□□□□ -0.56
SGCE-204ENST00000428696 METTL1Q9UBP6 276 aaKnown RBP11.57□□□□□ -0.56
SGCE-204ENST00000428696 LINC00527Q9UJ94 153 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 FGF16O43320 207 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 PI3P19957 117 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 GNB1P62873 340 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 ZNF79Q15937 498 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 TRIQKQ629K1 86 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 ZNF66Q6ZN08 573 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 SLC35E3Q7Z769 313 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 TOMM5Q8N4H5 51 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 KLHDC1Q8N7A1 406 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 POC5Q8NA72 575 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 ZBTB34Q8NCN2 500 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 ABHD5Q8WTS1 349 aa11.56□□□□□ -0.56
SGCE-204ENST00000428696 LIN7CQ9NUP9 197 aaKnown RBP11.56□□□□□ -0.56
SGCE-204ENST00000428696 ANKRD20A5PA0PJZ0 165 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 LINC01548A6NM66 108 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 GPR31O00270 319 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 RRHO14718 337 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 SLC25A17O43808 307 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 RLN1P04808 185 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 PTBP1P26599 531 aaKnown RBP eCLIP11.55□□□□□ -0.561e-6■■■□□ 14.7
SGCE-204ENST00000428696 ETV6P41212 452 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 COMPP49747 757 aaPredicted RBP11.55□□□□□ -0.56
SGCE-204ENST00000428696 AP3S2P59780 193 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 CATR1Q13166 79 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 PSG5Q15238 335 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 C5orf64Q2M2E5 130 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 HIST2H2BDQ6DRA6 164 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 SPAG16Q8N0X2 631 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 ARRDC1Q8N5I2 433 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 OR4C16Q8NGL9 310 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 TERB2Q8NHR7 220 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 SPATA3Q8NHX4 192 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 FXYD6Q9H0Q3 95 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 SERTAD4Q9NUC0 356 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 ZNF107Q9UII5 783 aaPredicted RBP11.55□□□□□ -0.56
SGCE-204ENST00000428696 MMP24Q9Y5R2 645 aa11.55□□□□□ -0.56
SGCE-204ENST00000428696 PGLYRP1O75594 196 aaPredicted RBP11.54□□□□□ -0.56
SGCE-204ENST00000428696 CNIH1O95406 144 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 CD74P04233 296 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 LGALS7P47929 136 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 FOXRED2Q8IWF2 684 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 SLC38A6Q8IZM9 456 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 NPBQ8NG41 125 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 OR51S1Q8NGJ8 323 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 MARCH1Q8TCQ1 289 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 NOL4LQ96MY1 436 aaPredicted RBP11.54□□□□□ -0.56
SGCE-204ENST00000428696 RNF5Q99942 180 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 HSPB9Q9BQS6 159 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 SRRQ9GZT4 340 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 PARP11Q9NR21 331 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 STAB1Q9NY15 2570 aa11.54□□□□□ -0.56
SGCE-204ENST00000428696 TENM1Q9UKZ4 2725 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 FCN1O00602 326 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 RPA2P15927 270 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 FAUP35544 74 aaKnown RBP11.53□□□□□ -0.56
SGCE-204ENST00000428696 PROK1P58294 105 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 ZNF45Q02386 682 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 IDO2Q6ZQW0 420 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 SSX9Q7RTT3 188 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 VKORC1L1Q8N0U8 176 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 Q8N2B8 174 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 FAM71E2Q8N5Q1 922 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 GDPD1Q8N9F7 314 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 OR4S2Q8NH73 311 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 DDB2Q92466 427 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 RSRP1Q9BUV0 290 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 ZNF747Q9BV97 191 aa11.53□□□□□ -0.56
SGCE-204ENST00000428696 SRRM4A7MD48 611 aaKnown RBP11.52□□□□□ -0.56
SGCE-204ENST00000428696 RAMP3O60896 148 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 KIR2DS2P43631 304 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 MSMO1Q15800 293 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 BAK1Q16611 211 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 VMA21Q3ZAQ7 101 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 TMEM177Q53S58 311 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 TBC1D26Q86UD7 250 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 ZFAND1Q8TCF1 268 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 WFDC12Q8WWY7 111 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 PRRT1Q99946 306 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 PTTG2Q9NZH5 202 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 SCP2D1Q9UJQ7 156 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 WSB1Q9Y6I7 421 aa11.52□□□□□ -0.56
SGCE-204ENST00000428696 KCNAB3O43448 404 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 ZNF735P0CB33 412 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 UCP3P55916 312 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 KRTAP10-3P60369 221 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 PJVKQ0ZLH3 352 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 EIF4EBP1Q13541 118 aaPredicted RBP11.52□□□□□ -0.57
SGCE-204ENST00000428696 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 ZNF329Q86UD4 541 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 OR5AU1Q8NGC0 362 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 OR13C8Q8NGS7 320 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 OSR1Q8TAX0 266 aaPredicted RBP11.52□□□□□ -0.57
SGCE-204ENST00000428696 HRASLSQ9HDD0 168 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 TPSG1Q9NRR2 321 aa11.52□□□□□ -0.57
SGCE-204ENST00000428696 COPZ2Q9P299 210 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms