RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 MRPS15P82914 257 aaKnown RBP12.55□□□□□ -0.4
VARS-216ENST00000428445 RAB11BQ15907 218 aa12.55□□□□□ -0.4
VARS-216ENST00000428445 IGSF11Q5DX21 431 aa12.55□□□□□ -0.4
VARS-216ENST00000428445 ZNF343Q6P1L6 599 aa12.55□□□□□ -0.4
VARS-216ENST00000428445 TMEM91Q6ZNR0 172 aa12.55□□□□□ -0.4
VARS-216ENST00000428445 MAFIPQ8WZ33 124 aa12.55□□□□□ -0.4
VARS-216ENST00000428445 WFDC10AQ9H1F0 79 aa12.55□□□□□ -0.4
VARS-216ENST00000428445 DUSP21Q9H596 190 aa12.55□□□□□ -0.4
VARS-216ENST00000428445 RAB22AQ9UL26 194 aa12.55□□□□□ -0.4
VARS-216ENST00000428445 BET1O15155 118 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 IFNA6P05013 189 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 GSTT2P0CG29 244 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 GSTT2BP0CG30 244 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 RRASP10301 218 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 AADACP22760 399 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 CBX3Q13185 183 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 TATDN3Q17R31 274 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 RPEL1Q2QD12 228 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 C2orf76Q3KRA6 126 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 IDO2Q6ZQW0 420 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 FAM3DQ96BQ1 224 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 USMG5Q96IX5 58 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 HARBI1Q96MB7 349 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 PHB2Q99623 299 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 OR2D2Q9H210 308 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 HIPK2Q9H2X6 1198 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 ACOT13Q9NPJ3 140 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 SIGLEC8Q9NYZ4 499 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 V9GY05 133 aa12.54□□□□□ -0.4
VARS-216ENST00000428445 SHOXO15266 292 aa12.53□□□□□ -0.4
VARS-216ENST00000428445 DENRO43583 198 aaKnown RBP12.53□□□□□ -0.4
VARS-216ENST00000428445 CD7P09564 240 aa12.53□□□□□ -0.4
VARS-216ENST00000428445 MECP2P51608 486 aaKnown RBP12.53□□□□□ -0.4
VARS-216ENST00000428445 RPS25P62851 125 aaKnown RBP12.53□□□□□ -0.4
VARS-216ENST00000428445 MLLT11Q13015 90 aaPredicted RBP12.53□□□□□ -0.4
VARS-216ENST00000428445 GTSCR1Q86UQ5 136 aa12.53□□□□□ -0.4
VARS-216ENST00000428445 DEFB125Q8N687 156 aa12.53□□□□□ -0.4
VARS-216ENST00000428445 KCNK7Q9Y2U2 307 aa12.53□□□□□ -0.4
VARS-216ENST00000428445 RBMY1BA6NDE4 496 aaKnown RBP12.52□□□□□ -0.41
VARS-216ENST00000428445 RBMY1EA6NEQ0 496 aaKnown RBP12.52□□□□□ -0.41
VARS-216ENST00000428445 FABP7O15540 132 aa12.52□□□□□ -0.41
VARS-216ENST00000428445 RBMY1DP0C7P1 496 aaKnown RBP12.52□□□□□ -0.41
VARS-216ENST00000428445 CD81P60033 236 aa12.52□□□□□ -0.41
VARS-216ENST00000428445 CD300EQ496F6 205 aaPredicted RBP12.52□□□□□ -0.41
VARS-216ENST00000428445 TMEM177Q53S58 311 aa12.52□□□□□ -0.41
VARS-216ENST00000428445 LCN12Q6JVE5 192 aa12.52□□□□□ -0.41
VARS-216ENST00000428445 LINC00322Q6ZN03 302 aaPredicted RBP12.52□□□□□ -0.41
VARS-216ENST00000428445 Q8N402 240 aa12.52□□□□□ -0.41
VARS-216ENST00000428445 ADAD2Q8NCV1 583 aaKnown RBP12.52□□□□□ -0.41
VARS-216ENST00000428445 OR10J5Q8NHC4 309 aa12.52□□□□□ -0.41
VARS-216ENST00000428445 ZNF230Q9UIE0 474 aaPredicted RBP12.52□□□□□ -0.41
VARS-216ENST00000428445 CEPT1Q9Y6K0 416 aa12.52□□□□□ -0.41
VARS-216ENST00000428445 TRBV6-7A0A0A0MS04 114 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 ZNF785A8K8V0 405 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 J3QRK9 145 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 BMPR1BO00238 502 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 RGS10O43665 173 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 HSMCR30P0CW71 290 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 ZNF45Q02386 682 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 TNXAQ16473 311 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 TEX45Q8NA69 505 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 RAB3CQ96E17 227 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 ADTRPQ96IZ2 230 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 NEURL2Q9BR09 285 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 CABLES2Q9BTV7 478 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 AKIP1Q9NQ31 210 aa12.51□□□□□ -0.41
VARS-216ENST00000428445 TMEM272A0A1B0GTI8 110 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 SHISA3A0PJX4 238 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 PDCD5O14737 125 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 HLA-AP01891 365 aaKnown RBP12.5□□□□□ -0.41
VARS-216ENST00000428445 GADD45AP24522 165 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 CALRP27797 417 aaKnown RBP12.5□□□□□ -0.41
VARS-216ENST00000428445 RHOGP84095 191 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 ARL6IP1Q15041 203 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 RTL8BQ17RB0 113 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 HES5Q5TA89 166 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 Q6ZS49 121 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 C19orf35Q6ZS72 473 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 PRSS48Q7RTY5 328 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 SNAPC3Q92966 411 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 MGLLQ99685 303 aa12.5□□□□□ -0.41
VARS-216ENST00000428445 A0A075B6Q4 140 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 TRAV1-2A0A0B4J238 106 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 LINC00473A8K010 186 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 PPP5D1E7EU14 171 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 CRYZL1O95825 349 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 FCGR3AP08637 254 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 OR9G9P0C7N8 305 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 GNB3P16520 340 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 RAB6AP20340 208 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 EXOSC2Q13868 293 aaKnown RBP12.49□□□□□ -0.41
VARS-216ENST00000428445 SSX1Q16384 188 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 PRSS8Q16651 343 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 FAM209BQ5JX69 171 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 OR10R2Q8NGX6 335 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 SRSF12Q8WXF0 261 aaKnown RBP12.49□□□□□ -0.41
VARS-216ENST00000428445 ACOT12Q8WYK0 555 aa12.49□□□□□ -0.41
VARS-216ENST00000428445 IGKV1D-8A0A087WSZ0 117 aa12.48□□□□□ -0.41
VARS-216ENST00000428445 METTL21EPA6NDL7 271 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms