RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 CLPXO76031 633 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 MELTFP08582 738 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 CD36P16671 472 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 COX7A1P24310 79 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 CDK2P24941 298 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 BLVRBP30043 206 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 IER3P46695 156 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 KLRD1Q13241 179 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ATXN7L3Q14CW9 347 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ARL6IP1Q15041 203 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 P2RY14Q15391 338 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 SLC9A3R2Q15599 337 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 NEDD8Q15843 81 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 C17orf58Q2M2W7 97 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 C2orf76Q3KRA6 126 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 TMEM30BQ3MIR4 351 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 Q3ZCU0 254 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 PHLDA2Q53GA4 152 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 PDLIM3Q53GG5 364 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 C6orf183Q5T699 404 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 MINOS1Q5TGZ0 78 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 C22orf42Q6IC83 251 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 OR10K2Q6IF99 312 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF497Q6ZNH5 498 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 NRARPQ7Z6K4 114 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 PDZD9Q8IXQ8 264 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 GAPTQ8N292 157 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ABHD12Q8N2K0 398 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 OR51D1Q8NGF3 324 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 OR56B1Q8NGI3 324 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 OR9G1Q8NH87 305 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF596Q8TC21 504 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ST6GALNAC6Q969X2 333 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 PTX4Q96A99 478 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 KCTD7Q96MP8 289 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 DUX3Q96PT4 197 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 C19orf24Q9BVV8 132 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 CLEC7AQ9BXN2 247 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 LPAR5Q9H1C0 372 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 CALYQ9NYX4 217 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 IDI2-AS1Q9NZ38 188 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 KCNIP1Q9NZI2 227 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 DPM3Q9P2X0 92 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 CACNG5Q9UF02 275 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 TRAPPC2LQ9UL33 140 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 PYGO1Q9Y3Y4 419 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 PEX16Q9Y5Y5 336 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 SOX21Q9Y651 276 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 MINOS1-NBL1R4GNA1 71 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 TRBV6-6A0A0A6YYG2 114 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 IGHV2-26A0A0B4J1V2 119 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 IGLV9-49A0A0B4J1Y8 123 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 A0A1B0GUS0 222 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 METTL21EPA6NDL7 271 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 VGLL3A8MV65 326 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ODF3BA8MYP8 253 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 LEUTXA8MZ59 168 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 OOSP1A8MZH6 123 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 AIPO00170 330 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 TOR1AO14656 332 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 FCGR3BO75015 233 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 MMP23AO75900 390 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 IGLV1-47P01700 117 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ARG1P05089 322 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 CRYBA1P05813 215 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 FRMD6-AS1P0C7T7 363 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 GADD45AP24522 165 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 HTR1DP28221 377 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 SAA4P35542 130 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 CEACAM3P40198 252 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 GLP1RP43220 463 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 CDX1P47902 265 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 DYNLT3P51808 116 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 TMEM50BP56557 158 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 DYNC1I2Q13409 638 aaKnown RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 UNC119Q13432 240 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 LRRC75BQ2VPJ9 315 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 HES5Q5TA89 166 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 PRAMEF5Q5TYX0 476 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 CROCCP3Q8IVE0 287 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 C8orf31Q8N9H6 132 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ADAD2Q8NCV1 583 aaKnown RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 RFESDQ8TAC1 157 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 MRGPRDQ8TDS7 321 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 DYRK2Q92630 601 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ARL11Q969Q4 196 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 FAM46BQ96A09 425 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 YIPF6Q96EC8 236 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 FAAP24Q9BTP7 215 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 OR51E2Q9H255 320 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ESM1Q9NQ30 184 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 PLEKHJ1Q9NW61 149 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF581Q9P0T4 197 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 ZNRD1Q9P1U0 126 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 MGAT4AQ9UM21 535 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 MAP1AP78559 2803 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 JMJD1CQ15652 2540 aa1.97□□□□□ -2.09
VPS13A-208ENST00000423463 NSD1Q96L73 2696 aaPredicted RBP1.97□□□□□ -2.09
VPS13A-208ENST00000423463 SETD2Q9BYW2 2564 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms