RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TBX5Q99593 518 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 TEAD3Q99594 435 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 FOXC2Q99958 501 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 UBQLN4Q9NRR5 601 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 MRPL22Q9NWU5 206 aaKnown RBP1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 TAS2R5Q9NYW4 299 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 MRM2Q9UI43 246 aaKnown RBP1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF229Q9UJW7 825 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 BAIAP2Q9UQB8 552 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 CFL2Q9Y281 166 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 SIGLEC9Q9Y336 463 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF337Q9Y3M9 751 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 CHCHD2Q9Y6H1 151 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 SEC16AO15027 2179 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 TANC2Q9HCD6 1990 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 ESPL1Q14674 2120 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 MED12LQ86YW9 2145 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 LAMA1P25391 3075 aa1.97□□□□□ -2.09
HMGB1P11-201ENST00000413899 CACNA1GO43497 2377 aa1.96□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRAV8-7A0A075B6U6 113 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 IGHV1-45A0A0A0MS14 117 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 TMED7-TICAM2A0A0A6YYA0 188 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 A0A1W2PRG6 482 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 IRGMA1A4Y4 181 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 C5orf63A6NC05 138 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 TVP23AA6NH52 213 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR4C45A6NMZ5 311 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 RIIAD1A6NNX1 92 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 M0R3G1 203 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 PLPP3O14495 311 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 PLA2G10O15496 165 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 EIF4E2O60573 245 aaKnown RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 HPGDSO60760 199 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 CDRT1O95170 752 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 IFNA16P05015 189 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 HMGN1P05114 100 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR8U9P0C7N5 309 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR8G3PP0DMU2 310 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 CCL3P10147 92 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 CD37P11049 281 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 CTLA4P16410 223 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 ZNF3P17036 446 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 ATF1P18846 271 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 MYL12AP19105 171 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 ALOX5APP20292 161 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 F8A1P23610 371 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 SDC2P34741 201 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 RPS27P42677 84 aaKnown RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 RPS5P46782 204 aaKnown RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 GDI2P50395 445 aaKnown RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 PRRX1P54821 245 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 PITPNAQ00169 270 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 FMODQ06828 376 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 BIKQ13323 160 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 ZNHIT3Q15649 155 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 MRPL23Q16540 153 aaKnown RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 RGS21Q2M5E4 152 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 SOHLH1Q5JUK2 328 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 C1orf140Q5VVS0 124 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 HBMQ6B0K9 141 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 UNQ9165/PRO28630Q6UXU0 137 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 GRINAQ7Z429 371 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 CMTM1Q8IZ96 169 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR6V1Q8N148 313 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 ACBD7Q8N6N7 88 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 DRAXINQ8NBI3 349 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 C11orf72Q8NBR9 251 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 CHST4Q8NCG5 386 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC26A10Q8NG04 563 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR4M1Q8NGD0 313 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR51A4Q8NGJ6 313 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR5H6Q8NGV6 325 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR8K3Q8NH51 312 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 CT55Q8WUE5 264 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 RTN4IP1Q8WWV3 396 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 S100ZQ8WXG8 99 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 PSMF1Q92530 271 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 KIAA1143Q96AT1 154 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 SMIM19Q96E16 107 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 RNF170Q96K19 258 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 ZNF488Q96MN9 340 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 ERMAPQ96PL5 475 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 DERL3Q96Q80 235 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 HSD17B10Q99714 261 aaKnown RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 KCNS3Q9BQ31 491 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 SULT4A1Q9BR01 284 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 CCDC32Q9BV29 185 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 TMED9Q9BVK6 235 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 PRRG3Q9BZD7 231 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 C6orf62Q9GZU0 229 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 SYT4Q9H2B2 425 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR51V1Q9H2C8 321 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 C1orf198Q9H425 327 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 WDR54Q9H977 334 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 TMEM27Q9HBJ8 222 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 WFDC1Q9HC57 220 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 ABCB9Q9NP78 766 aa1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 EXOSC4Q9NPD3 245 aaKnown RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 RPRD1BQ9NQG5 326 aaKnown RBP1.96□□□□□ -2.1
HMGB1P11-201ENST00000413899 INIPQ9NRY2 104 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms