RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 MDFIC2A0A1B0GVS7 189 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 L7N2F9 121 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 HSD17B6O14756 317 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 TIMM23O14925 209 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 FABP7O15540 132 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 XRCC3O43542 346 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 APOA1P02647 267 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 CLDN12P56749 244 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 OR10A3P58181 314 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 HLA-DRB3P79483 266 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 CBX3Q13185 183 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 ZNF846Q147U1 533 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 MSMO1Q15800 293 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 CDNFQ49AH0 187 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 CT45A1Q5HYN5 189 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 PLAC9Q5JTB6 97 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 UBE2NLQ5JXB2 153 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 SPANXN2Q5MJ10 180 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 IDNKQ5T6J7 187 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 TGIF2LXQ8IUE1 241 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 COMMD1Q8N668 190 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 ZNF439Q8NDP4 499 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 OR10J5Q8NHC4 309 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 CT45A3Q8NHU0 189 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 MCFD2Q8NI22 146 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 LINC01006Q8NI28 216 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 IL17DQ8TAD2 202 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 RTN4IP1Q8WWV3 396 aaPredicted RBP4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 ADTRPQ96IZ2 230 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 TMEM68Q96MH6 324 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 NKX3-1Q99801 234 aaPredicted RBP4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 CABLES2Q9BTV7 478 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 MMP27Q9H306 513 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 TMPRSS5Q9H3S3 457 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 PALMDQ9NP74 551 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 GAR1Q9NY12 217 aaKnown RBP4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 ZNF580Q9UK33 172 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 MOB4Q9Y3A3 225 aa4.52□□□□□ -1.69
GAPDHP42-201ENST00000406848 TRBV6-7A0A0A0MS04 114 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 A0A1W2PPI3 338 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 OR5H14A6NHG9 310 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 SULT1C2O00338 296 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 KCNAB3O43448 404 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 SPDEFO95238 335 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 MOSP00540 346 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 FCGR3AP08637 254 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 RRASP10301 218 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 SLC2A2P11168 524 aaPredicted RBP4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 ZNF182P17025 639 aaPredicted RBP4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 SLC6A1P30531 599 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 CEACAM6P40199 344 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 GNG10P50151 68 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 RAB13P51153 203 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 DLX1P56177 255 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 PROK1P58294 105 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 GNG2P59768 71 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 ARPC4P59998 168 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 VBP1P61758 197 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 LSM3P62310 102 aaKnown RBP4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 MXD1Q05195 221 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 HERPUD1Q15011 391 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 CTF1Q16619 201 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 ZNF260Q3ZCT1 412 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 IGFL4Q6B9Z1 124 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 CNIH2Q6PI25 160 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 BAIAP2L2Q6UXY1 529 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 Q6ZSV7 163 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 ZNF833PQ6ZTB9 187 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 MOB3BQ86TA1 216 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 LYG1Q8N1E2 194 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 DYNAPQ8N1N2 210 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 TMEM217Q8N7C4 229 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 OR1L1Q8NH94 360 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 C17orf50Q8WW18 174 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 IL1F10Q8WWZ1 152 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 DUX5Q96PT3 197 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 SLC25A33Q9BSK2 321 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 KRTAP4-5Q9BYR2 181 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 C6orf62Q9GZU0 229 aaPredicted RBP4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 ZNF581Q9P0T4 197 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 ZNF221Q9UK13 617 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 KCNK7Q9Y2U2 307 aa4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 SOX21Q9Y651 276 aaPredicted RBP4.51□□□□□ -1.69
GAPDHP42-201ENST00000406848 TRAV18A0A075B6X5 111 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 TRAV39A0A0B4J263 110 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 MEX3AA1L020 520 aaKnown RBP4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 M0QZ24 198 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 RGS5O15539 181 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 NPSP0C0P6 89 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 OR5H8P0DN80 308 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 GNB3P16520 340 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 PPP1CCP36873 323 aaKnown RBP4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 LGALS7P47929 136 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 EFNB2P52799 333 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 TAS2R46P59540 309 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 DEFA1P59665 94 aa4.5□□□□□ -1.69
GAPDHP42-201ENST00000406848 DEFA3P59666 94 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms