RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SLA2Q9H6Q3 261 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 SCOCQ9UIL1 159 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 LOC100506127A0A0U1RQW1 187 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 TMEM235A6NFC5 223 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 LINC01619G3V211 115 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 OVOL1O14753 267 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 ARPC1BO15143 372 aaKnown RBP10.38□□□□□ -0.75
VCX3A-202ENST00000398729 IGLV2-23P01705 113 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 ECI1P42126 302 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 SCAND1P57086 179 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 TPPP2P59282 170 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 GNG2P59768 71 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 MXD1Q05195 221 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 NEDD8Q15843 81 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 KCTD21Q4G0X4 260 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 BVESQ8NE79 360 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 NUDCD2Q8WVJ2 157 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 DCUN1D4Q92564 292 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 C5orf30Q96GV9 206 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 MS4A10Q96PG2 267 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 B9D2Q9BPU9 175 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 RHBDL2Q9NX52 303 aa10.38□□□□□ -0.75
VCX3A-202ENST00000398729 TRGV3P03979 118 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 CRYGBP07316 175 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 CD36P16671 472 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 DUTP33316 252 aaKnown RBP10.37□□□□□ -0.75
VCX3A-202ENST00000398729 VMA21Q3ZAQ7 101 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 IDNKQ5T6J7 187 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 CNIH2Q6PI25 160 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 TMEM68Q96MH6 324 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 LYSTQ99698 3801 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 RNF167Q9H6Y7 350 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 ZNF355PQ9NSJ1 428 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 OR2W1Q9Y3N9 320 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 ETV7Q9Y603 341 aa10.37□□□□□ -0.75
VCX3A-202ENST00000398729 IGHV4OR15-8A0A075B7B6 117 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 A0A087WW49 117 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 H3BUA1 57 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 J3QRK9 145 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 SLC22A5O76082 557 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 CRYZL1O95825 349 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 IGHV3-11P01762 117 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 HSPB1P04792 205 aaKnown RBP10.36□□□□□ -0.75
VCX3A-202ENST00000398729 CLEC2LP0C7M8 214 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 NFYAP23511 347 aaPredicted RBP10.36□□□□□ -0.75
VCX3A-202ENST00000398729 SLURP1P55000 103 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 SSBP2P81877 361 aaPredicted RBP10.36□□□□□ -0.75
VCX3A-202ENST00000398729 PJVKQ0ZLH3 352 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 ZNF429Q86V71 674 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 ZNF645Q8N7E2 425 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 POC5Q8NA72 575 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 DDB2Q92466 427 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 DLX4Q92988 240 aaPredicted RBP10.36□□□□□ -0.75
VCX3A-202ENST00000398729 PRR25Q96S07 402 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 ANXA10Q9UJ72 324 aa10.36□□□□□ -0.75
VCX3A-202ENST00000398729 ZNF256Q9Y2P7 627 aaPredicted RBP10.36□□□□□ -0.75
VCX3A-202ENST00000398729 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 SRRM4A7MD48 611 aaKnown RBP10.35□□□□□ -0.75
VCX3A-202ENST00000398729 LINC00473A8K010 186 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 SSX5O60225 188 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 HLA-DQB1P01920 261 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 UBE2KP61086 200 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 TIMM50Q3ZCQ8 353 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 TEX45Q8NA69 505 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 OR5T1Q8NG75 326 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 OR5H6Q8NGV6 325 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 OSR1Q8TAX0 266 aaPredicted RBP10.35□□□□□ -0.75
VCX3A-202ENST00000398729 RHOVQ96L33 236 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 MRPS7Q9Y2R9 242 aaKnown RBP10.35□□□□□ -0.75
VCX3A-202ENST00000398729 PRELID3BQ9Y3B1 194 aa10.35□□□□□ -0.75
VCX3A-202ENST00000398729 TRAV18A0A075B6X5 111 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 A0A0A6YYH2 397 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 C13orf42A0A1B0GVH6 325 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 A6NJ64 397 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 TMEM127O75204 238 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 SAP30O75446 220 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 TUSC2O75896 110 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 LY86O95711 162 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 KCTD9Q7L273 389 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 SLC25A38Q96DW6 304 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 PHB2Q99623 299 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 DCUN1D5Q9BTE7 237 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 DIABLOQ9NR28 239 aa10.34□□□□□ -0.75
VCX3A-202ENST00000398729 RBMX2Q9Y388 322 aaKnown RBP10.34□□□□□ -0.75
VCX3A-202ENST00000398729 LSM4Q9Y4Z0 139 aaKnown RBP10.34□□□□□ -0.75
VCX3A-202ENST00000398729 CREBL2O60519 120 aaPredicted RBP10.33□□□□□ -0.76
VCX3A-202ENST00000398729 FCGR3BO75015 233 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 ACTL6BO94805 426 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 ARPC4P59998 168 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 TNXAQ16473 311 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 PRSS8Q16651 343 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 ACSM6Q6P461 480 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 CROCCP3Q8IVE0 287 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 BEST4Q8NFU0 473 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 ACOT12Q8WYK0 555 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 HSD17B10Q99714 261 aaKnown RBP10.33□□□□□ -0.76
VCX3A-202ENST00000398729 RANGRFQ9HD47 186 aaPredicted RBP10.33□□□□□ -0.76
VCX3A-202ENST00000398729 VCX3AQ9NNX9 186 aa10.33□□□□□ -0.76
VCX3A-202ENST00000398729 SPATA2Q9UM82 520 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms