RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 PHYHD1Q5SRE7 291 aa8.4□□□□□ -1.07
APTX-207ENST00000397172 ZNF324BQ6AW86 544 aaPredicted RBP8.4□□□□□ -1.07
APTX-207ENST00000397172 MTURNQ8N3F0 131 aa8.4□□□□□ -1.07
APTX-207ENST00000397172 UHRF2Q96PU4 802 aa8.4□□□□□ -1.07
APTX-207ENST00000397172 OR6C1Q96RD1 312 aa8.4□□□□□ -1.07
APTX-207ENST00000397172 SFXN3Q9BWM7 321 aa8.4□□□□□ -1.07
APTX-207ENST00000397172 MRPL13Q9BYD1 178 aaKnown RBP8.4□□□□□ -1.07
APTX-207ENST00000397172 CHD3Q12873 2000 aaKnown RBP8.4□□□□□ -1.07
APTX-207ENST00000397172 CPAMD8Q8IZJ3 1885 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 MPDZO75970 2070 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 A0A1B0GUS0 222 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 A0A1W2PPV4 95 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 RBFOX2O43251 390 aaKnown RBP eCLIP8.39□□□□□ -1.07
APTX-207ENST00000397172 CLPSP04118 112 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 C3orf79P0CE67 100 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 SMIM17P0DL12 118 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 CD33P20138 364 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 REG1BP48304 166 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 LGALS4P56470 323 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 PPP1CAP62136 330 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 C9orf135Q5VTT2 229 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 SLC25A47Q6Q0C1 308 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 ZNF818PQ6ZRF7 136 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 TCF23Q7RTU1 214 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 MED29Q9NX70 200 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 COPS7AQ9UBW8 275 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 NAT8BQ9UHF3 227 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 PPIAL4AQ9Y536 164 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 CACNA1CQ13936 2221 aa8.39□□□□□ -1.07
APTX-207ENST00000397172 KNTC1P50748 2209 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 IGKV1D-43A0A0B4J1Z2 117 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 IGHV5-51A0A0C4DH38 117 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 A0A1W2PS18 150 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 H0YIG0 161 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 TRAPPC2LH3BP13 241 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 PGLYRP1O75594 196 aaPredicted RBP8.38□□□□□ -1.07
APTX-207ENST00000397172 NDUFB4O95168 129 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 FKBP2P26885 142 aaKnown RBP8.38□□□□□ -1.07
APTX-207ENST00000397172 SRD5A2P31213 254 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 IER3P46695 156 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 FUT6P51993 359 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 FBXW4P57775 412 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 LINC00310P59036 64 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 SELENOVP59797 346 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 ARG2P78540 354 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 TGFBR3Q03167 851 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 FOXC1Q12948 553 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 SPANXN5Q5MJ07 72 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 RASL11AQ6T310 242 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 APOBEC3DQ96AK3 386 aaPredicted RBP8.38□□□□□ -1.07
APTX-207ENST00000397172 SF3B5Q9BWJ5 86 aaKnown RBP8.38□□□□□ -1.07
APTX-207ENST00000397172 GNB4Q9HAV0 340 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 PNRC2Q9NPJ4 139 aaKnown RBP8.38□□□□□ -1.07
APTX-207ENST00000397172 PNO1Q9NRX1 252 aaKnown RBP8.38□□□□□ -1.07
APTX-207ENST00000397172 LIN7CQ9NUP9 197 aaKnown RBP8.38□□□□□ -1.07
APTX-207ENST00000397172 OR51B2Q9Y5P1 312 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 SPTBN4Q9H254 2564 aa8.38□□□□□ -1.07
APTX-207ENST00000397172 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 GAGE10A6NGK3 116 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 LIPT2A6NK58 231 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 SLC22A20A6NK97 555 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 C9JCJ5 164 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 G3V4G9 280 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 TGFBR3LH3BV60 316 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 RER1O15258 196 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 TNFSF12O43508 249 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 TUSC2O75896 110 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 CA2P00918 260 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 HLA-DRB1P01911 266 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 CD1BP29016 333 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 ARL4DP49703 201 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 GNB1P62873 340 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 ARF1P84077 181 aaKnown RBP8.37□□□□□ -1.07
APTX-207ENST00000397172 SCGB2A2Q13296 93 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 MFAP5Q13361 173 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 OR10V1Q8NGI7 309 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 OR5A2Q8NGI9 324 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 ZNF721Q8TF20 911 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 FAM216AQ8WUB2 273 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 CACNG5Q9UF02 275 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 WASHC3Q9Y3C0 194 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 MSRB2Q9Y3D2 182 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 LOXL2Q9Y4K0 774 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 PTPRBP23467 1997 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 FREM3P0C091 2139 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 AHRRA9YTQ3 701 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 H0YJW9 148 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 TAX1BP3O14907 124 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 MPDU1O75352 247 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 NXPH3O95157 252 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 AMY1AP04745 511 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 CTSBP07858 339 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 C1QTNF9P0C862 333 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 IAPPP10997 89 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 PVRP15151 417 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 NPY1RP25929 384 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 CEACAM3P40198 252 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 PRSS12P56730 875 aa8.37□□□□□ -1.07
APTX-207ENST00000397172 RBM11P57052 281 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms