RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 VSIG4Q9Y279 399 aa6.98□□□□□ -1.29
TRBV27-201ENST00000390399 MEIS3P1A6NDR6 274 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 LINC00473A8K010 186 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 ARPC1BO15143 372 aaKnown RBP6.97□□□□□ -1.29
TRBV27-201ENST00000390399 XRCC3O43542 346 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 SOX15O60248 233 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 TUSC2O75896 110 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 CNIH1O95406 144 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 CRYZL1O95825 349 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 FCER2P06734 321 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 RAB9AP51151 201 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 TAS2R20P59543 309 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 VBP1P61758 197 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 KIAA0141Q14154 515 aaPredicted RBP6.97□□□□□ -1.29
TRBV27-201ENST00000390399 FXYD3Q14802 87 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 VMA21Q3ZAQ7 101 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 ACTBL2Q562R1 376 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 TMEM69Q5SWH9 247 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 PYHIN1Q6K0P9 492 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 KCTD9Q7L273 389 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 ZNF491Q8N8L2 437 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 LFNGQ8NES3 379 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 OR5M8Q8NGP6 311 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 CASTOR1Q8WTX7 329 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 KCTD12Q96CX2 325 aaKnown RBP6.97□□□□□ -1.29
TRBV27-201ENST00000390399 OR5B12Q96R08 314 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 GNB4Q9HAV0 340 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 IFT46Q9NQC8 304 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 RBMX2Q9Y388 322 aaKnown RBP6.97□□□□□ -1.29
TRBV27-201ENST00000390399 PRELID3BQ9Y3B1 194 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 NUBP2Q9Y5Y2 271 aa6.97□□□□□ -1.29
TRBV27-201ENST00000390399 SRRM4A7MD48 611 aaKnown RBP6.96□□□□□ -1.3
TRBV27-201ENST00000390399 I3L521 148 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 FCGR3BO75015 233 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 CRYGBP07316 175 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 OR8U8P0C7N1 319 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 AADACP22760 399 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 CD40LGP29965 261 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 HOXD3P31249 432 aaPredicted RBP6.96□□□□□ -1.3
TRBV27-201ENST00000390399 FCGR2CP31995 323 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 UBE2KP61086 200 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 RUNX1Q01196 453 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 PJVKQ0ZLH3 352 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 FHL3Q13643 280 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 AKIRIN2Q53H80 203 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 OR2B11Q5JQS5 317 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 OVCH2Q7RTZ1 564 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 OR11H1Q8NG94 326 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 OSR1Q8TAX0 266 aaPredicted RBP6.96□□□□□ -1.3
TRBV27-201ENST00000390399 MRAPQ8TCY5 172 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 SECTM1Q8WVN6 248 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 TCTEX1D2Q8WW35 142 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 SNAPC3Q92966 411 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 HSD17B10Q99714 261 aaKnown RBP6.96□□□□□ -1.3
TRBV27-201ENST00000390399 DCUN1D5Q9BTE7 237 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 COMMD3Q9UBI1 195 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 MRPS7Q9Y2R9 242 aaKnown RBP6.96□□□□□ -1.3
TRBV27-201ENST00000390399 NOTCH1P46531 2555 aa6.96□□□□□ -1.3
TRBV27-201ENST00000390399 GABARAPO95166 117 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 PPYP01298 95 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 IGLV2-14P01704 120 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 EIF4EP06730 217 aaKnown RBP6.95□□□□□ -1.3
TRBV27-201ENST00000390399 LGALS1P09382 135 aaKnown RBP6.95□□□□□ -1.3
TRBV27-201ENST00000390399 SAA1P0DJI8 122 aaPredicted RBP6.95□□□□□ -1.3
TRBV27-201ENST00000390399 TPPP2P59282 170 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 RPL30P62888 115 aaKnown RBP6.95□□□□□ -1.3
TRBV27-201ENST00000390399 SSBP2P81877 361 aaPredicted RBP6.95□□□□□ -1.3
TRBV27-201ENST00000390399 ZNF616Q08AN1 781 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 CDK10Q15131 360 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 TNXAQ16473 311 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 IDO2Q6ZQW0 420 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 ANKRD13BQ86YJ7 626 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 TEX45Q8NA69 505 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 OR5AP2Q8NGF4 316 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 OR1N2Q8NGR9 330 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 OR4S2Q8NH73 311 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 MS4A10Q96PG2 267 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 PHB2Q99623 299 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 MRPS26Q9BYN8 205 aaKnown RBP6.95□□□□□ -1.3
TRBV27-201ENST00000390399 NAA50Q9GZZ1 169 aaKnown RBP6.95□□□□□ -1.3
TRBV27-201ENST00000390399 SLA2Q9H6Q3 261 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 ZNF355PQ9NSJ1 428 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 TAS2R8Q9NYW2 309 aa6.95□□□□□ -1.3
TRBV27-201ENST00000390399 H3BUA1 57 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 TNFSF12O43508 249 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 CREBL2O60519 120 aaPredicted RBP6.94□□□□□ -1.3
TRBV27-201ENST00000390399 IGHV3-11P01762 117 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 APOA1P02647 267 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 TRGV3P03979 118 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 PRSS3P35030 304 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 RORCP51449 518 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 FXYD4P59646 89 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 KRTAP10-11P60412 298 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 HERV-K104P61576 105 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 EGFEM1PQ0D2K5 195 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 EIF4EBP1Q13541 118 aaPredicted RBP6.94□□□□□ -1.3
TRBV27-201ENST00000390399 MSMO1Q15800 293 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 CTF1Q16619 201 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 PRSS8Q16651 343 aa6.94□□□□□ -1.3
TRBV27-201ENST00000390399 MRGPRG-AS1Q2M3A8 158 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms